RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 SPATA31D3P0C874 917 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 SKIP12755 728 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 AFF1P51825 1210 aaKnown RBP17.52■□□□□ 0.4
UBXN1-201ENST00000294119 DSG1Q02413 1049 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 RNASELQ05823 741 aaKnown RBP17.52■□□□□ 0.4
UBXN1-201ENST00000294119 SIM2Q14190 667 aaPredicted RBP17.52■□□□□ 0.4
UBXN1-201ENST00000294119 SWSAP1Q6NVH7 229 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 EFCAB12Q6NXP0 572 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 ZNF852Q6ZMS4 543 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 PRR23BQ6ZRT6 265 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 SPATA31D4Q6ZUB0 917 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 FGF13Q92913 245 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 GTF3C6Q969F1 213 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 RRP36Q96EU6 259 aaKnown RBP17.52■□□□□ 0.4
UBXN1-201ENST00000294119 MBOAT7Q96N66 472 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
UBXN1-201ENST00000294119 GBP3Q9H0R5 595 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 CHST7Q9NS84 486 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 RXFP3Q9NSD7 469 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 FAM105AQ9NUU6 356 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 INPP5FQ9Y2H2 1132 aa17.52■□□□□ 0.4
UBXN1-201ENST00000294119 COL4A2P08572 1712 aa17.52■□□□□ 0.39
UBXN1-201ENST00000294119 WDR81Q562E7 1941 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 ZMYND10O75800 440 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 ALDH2P05091 517 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 GLUD2P49448 558 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 RTN1Q16799 776 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 AGMOQ6ZNB7 445 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 GPR65Q8IYL9 337 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 LRRC71Q8N4P6 559 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 GATA6Q92908 595 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 ZNF668Q96K58 619 aaPredicted RBP17.51■□□□□ 0.39
UBXN1-201ENST00000294119 LARP6Q9BRS8 491 aaKnown RBP17.51■□□□□ 0.39
UBXN1-201ENST00000294119 LHX6Q9UPM6 363 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 FAN1Q9Y2M0 1017 aa17.51■□□□□ 0.39
UBXN1-201ENST00000294119 IGSF10Q6WRI0 2623 aa17.5■□□□□ 0.39
UBXN1-201ENST00000294119 CPLX1O14810 134 aa17.5■□□□□ 0.39
UBXN1-201ENST00000294119 GAS2O43903 313 aaKnown RBP17.5■□□□□ 0.39
UBXN1-201ENST00000294119 CSDE1O75534 798 aaKnown RBP17.5■□□□□ 0.39
UBXN1-201ENST00000294119 TMOD1P28289 359 aa17.5■□□□□ 0.39
UBXN1-201ENST00000294119 CNR2P34972 360 aa17.5■□□□□ 0.39
UBXN1-201ENST00000294119 LONRF3Q496Y0 759 aa17.5■□□□□ 0.39
UBXN1-201ENST00000294119 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
UBXN1-201ENST00000294119 MRPS17Q9Y2R5 130 aaKnown RBP17.5■□□□□ 0.39
UBXN1-201ENST00000294119 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
UBXN1-201ENST00000294119 RAB27AP51159 221 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 CCR3P51677 355 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 STK3Q13188 491 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 PPP2R5DQ14738 602 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 MIS18BP1Q6P0N0 1132 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.49■□□□□ 0.39
UBXN1-201ENST00000294119 GRASPQ7Z6J2 395 aaPredicted RBP17.49■□□□□ 0.39
UBXN1-201ENST00000294119 KXD1Q9BQD3 176 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 PHF20Q9BVI0 1012 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 FNIP2Q9P278 1114 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 SEC63Q9UGP8 760 aaKnown RBP17.49■□□□□ 0.39
UBXN1-201ENST00000294119 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
UBXN1-201ENST00000294119 PAPSS2O95340 614 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-201ENST00000294119 LARGE1O95461 756 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 CCT2P78371 535 aaKnown RBP17.48■□□□□ 0.39
UBXN1-201ENST00000294119 NTHL1P78549 312 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
UBXN1-201ENST00000294119 SCRN1Q12765 414 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 STPG1Q5TH74 334 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 TWF2Q6IBS0 349 aaKnown RBP17.48■□□□□ 0.39
UBXN1-201ENST00000294119 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 MRPL10Q7Z7H8 261 aaKnown RBP17.48■□□□□ 0.39
UBXN1-201ENST00000294119 PALB2Q86YC2 1186 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 CCDC83Q8IWF9 413 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 FAM160A2Q8N612 972 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-201ENST00000294119 HEBP1Q9NRV9 189 aa17.48■□□□□ 0.39
UBXN1-201ENST00000294119 DDX39AO00148 427 aaKnown RBP17.47■□□□□ 0.39
UBXN1-201ENST00000294119 ECI2O75521 394 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 ZNF806P0C7X5 589 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 IFNAR1P17181 557 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 SRSF5Q13243 272 aaKnown RBP17.47■□□□□ 0.39
UBXN1-201ENST00000294119 GAS6Q14393 721 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 SF3A2Q15428 464 aaKnown RBP17.47■□□□□ 0.39
UBXN1-201ENST00000294119 AASDHQ4L235 1098 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-201ENST00000294119 COLGALT2Q8IYK4 626 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 SRBD1Q8N5C6 995 aaKnown RBP17.47■□□□□ 0.39
UBXN1-201ENST00000294119 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 ITFG1Q8TB96 612 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 URGCPQ8TCY9 931 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 DNASE1L2Q92874 299 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.47■□□□□ 0.394e-6■■■□□ 19
UBXN1-201ENST00000294119 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 FBXW11Q9UKB1 542 aa17.47■□□□□ 0.39
UBXN1-201ENST00000294119 POU2F2P09086 479 aa17.46■□□□□ 0.39
UBXN1-201ENST00000294119 RXRAP19793 462 aa17.46■□□□□ 0.39
UBXN1-201ENST00000294119 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
UBXN1-201ENST00000294119 SATB1Q01826 763 aa17.46■□□□□ 0.39
UBXN1-201ENST00000294119 DSC1Q08554 894 aa17.46■□□□□ 0.39
UBXN1-201ENST00000294119 DRP2Q13474 957 aa17.46■□□□□ 0.39
UBXN1-201ENST00000294119 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
UBXN1-201ENST00000294119 NPAS3Q8IXF0 933 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms