RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ARL1P40616 181 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 CETN1Q12798 172 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 TCP11X2Q5H9J9 407 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 FAM126BQ8IXS8 530 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 PITPNM1O00562 1244 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 TFRCP02786 760 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 MCF2P10911 925 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 LIG4P49917 911 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 SLC39A5Q6ZMH5 540 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 TMEM106CQ9BVX2 250 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 C11orf49Q9H6J7 331 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 PDCD11Q14690 1871 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 TRIOBPQ9H2D6 2365 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 TRIM49BA6NDI0 452 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 PMM2O15305 246 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 STX10O60499 249 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 EPB41P11171 864 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 PSMC2P35998 433 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 SLC39A4Q6P5W5 647 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 MPZL3Q6UWV2 235 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 DNAJB3Q8WWF6 145 aa9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.18□□□□□ -0.94
PTPDC1-201ENST00000288976 A0A087WZ62 844 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 KCNJ18B7U540 433 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 EXTL3O43909 919 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 TOM1L1O75674 476 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 VTNP04004 478 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 NR2F2P24468 414 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 MTIF2P46199 727 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 BFSP2Q13515 415 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 PRPF4BQ13523 1007 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 KCNJ12Q14500 433 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 NELFCDQ8IXH7 590 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 FDXACB1Q9BRP7 624 aaPredicted RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 FRMD4BQ9Y2L6 1034 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 ABLIM1O14639 778 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 HNRNPDLO14979 420 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 B4GALT4O60513 344 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 TSPAN1O60635 241 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 RFC2P35250 354 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 CETN2P41208 172 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 NOP2P46087 812 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 NLRP11P59045 1033 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 ADAM9Q13443 819 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 USP37Q86T82 979 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 GPD1LQ8N335 351 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 DHX38Q92620 1227 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 IQCDQ96DY2 449 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 BORCS6Q96GS4 357 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 NLRP4Q96MN2 994 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 KIFC3Q9BVG8 833 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 FANCLQ9NW38 375 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 HSPBP1Q9NZL4 362 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 LPXNO60711 386 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 GJC1P36383 396 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 GPS2Q13227 327 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 XXYLT1Q8NBI6 393 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 MRFAP1L1Q96HT8 127 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 CNOT6LQ96LI5 555 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 SRRTQ9BXP5 876 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 NACA2Q9H009 215 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 AGPAT5Q9NUQ2 364 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 MAPK8IP1Q9UQF2 711 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 LTBP2Q14767 1821 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 ADRB2P07550 413 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 SRGAP2CP0DJJ0 459 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 GTF2H1P32780 548 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 ZNF200P98182 395 aaPredicted RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 SURF1Q15526 300 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 ATF7IP2Q5U623 682 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 ARMCX5Q6P1M9 558 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 INTS8Q75QN2 995 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 UBE2Q1Q7Z7E8 422 aa9.17□□□□□ -0.94
PTPDC1-201ENST00000288976 EVPLQ92817 2033 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 A0A0B4J269 797 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 FAM170AA1A519 330 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 GPR182O15218 404 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 ADSSP30520 456 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 KCNA1Q09470 495 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 NOLC1Q14978 699 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 NOTUMQ6P988 496 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 KSR1Q8IVT5 923 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 TMC2Q8TDI7 906 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 MFSD14AQ96MC6 490 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 CDY2AQ9Y6F7 541 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 A0A1B0GUA9 196 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 P4HA2O15460 535 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 ERLIN2O94905 339 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 ABL1P00519 1130 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 EIF4BP23588 611 aaKnown RBP9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 AP3M2P53677 418 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 STX17P56962 302 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 IRF2BP1Q8IU81 584 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms