RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 PNMA5Q96PV4 448 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 IKZF4Q9H2S9 585 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 MX2P20592 715 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 AOC3Q16853 763 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 RABGAP1LQ5R372 815 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 VCX3AQ9NNX9 186 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 TACC3Q9Y6A5 838 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 STK24Q9Y6E0 443 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 ABCB11O95342 1321 aa16.72■□□□□ 0.27
USP43-201ENST00000285199 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
USP43-201ENST00000285199 KCNA3P22001 575 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 LMNB2Q03252 620 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 TEKT4Q8WW24 435 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 PWWP2AQ96N64 755 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 LXNQ9BS40 222 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 JMJD4Q9H9V9 463 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 DNM1LO00429 736 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 COPEO14579 308 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 POLGP54098 1239 aaPredicted RBP16.71■□□□□ 0.27
USP43-201ENST00000285199 KCTD6Q8NC69 237 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 NUF2Q9BZD4 464 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 FAM47DPA6NHR8 397 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 WDR64B1ANS9 1081 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 PIK3R2O00459 728 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 CDK17Q00537 523 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 PPP6R3Q5H9R7 873 aaPredicted RBP16.71■□□□□ 0.27
USP43-201ENST00000285199 KRT35Q92764 455 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 THTPAQ9BU02 230 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 TMEM206Q9H813 350 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
USP43-201ENST00000285199 PPLO60437 1756 aa16.71■□□□□ 0.27
USP43-201ENST00000285199 DNAJC6O75061 913 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 COILP38432 576 aaPredicted RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 ALDH18A1P54886 795 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 C3orf67Q6ZVT6 689 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 CYFIP1Q7L576 1253 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 EEPD1Q7L9B9 569 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 RIMS1Q86UR5 1692 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 ZBTB39O15060 712 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 NVLO15381 856 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 STAT2P52630 851 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 CYP2W1Q8TAV3 490 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP43-201ENST00000285199 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 MRPL47Q9HD33 250 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 BATF3Q9NR55 127 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP43-201ENST00000285199 MAP3K6O95382 1288 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 CBX6O95503 412 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 RPL21P46778 160 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 ZNF543Q08ER8 600 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 LVRNQ6Q4G3 990 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 SCYL1Q96KG9 808 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 WDR11Q9BZH6 1224 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 CARD9Q9H257 536 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 LOC100653049A0A140TA62 436 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 DENND3A2RUS2 1198 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 RAD17O75943 681 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 KRT34O76011 436 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 CALCAP01258 141 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 BTKQ06187 659 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 RCN1Q15293 331 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 ERICH1Q86X53 443 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 NAF1Q96HR8 494 aaKnown RBP16.7■□□□□ 0.26
USP43-201ENST00000285199 SH3GL2Q99962 352 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
USP43-201ENST00000285199 LPXNO60711 386 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 TMEM253P0C7T8 217 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 RALAP11233 206 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 GNAT1P11488 350 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 KRT10P13645 584 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 CASP5P51878 434 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 IRX1P78414 480 aaPredicted RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 PLCB4Q15147 1175 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 SLC13A5Q86YT5 568 aaPredicted RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 ATL2Q8NHH9 583 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 TDRD3Q9H7E2 651 aaKnown RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 NGRNQ9NPE2 291 aaKnown RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 NEU2Q9Y3R4 380 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 PALM3A6NDB9 673 aaPredicted RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 hCG_1984214I3L0E3 225 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 CASQ2O14958 399 aaPredicted RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 SGPL1O95470 568 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 NME8Q8N427 588 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 ZNF713Q8N859 430 aaPredicted RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 ATXN7L3BQ96GX2 97 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 TAS2R14Q9NYV8 317 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
USP43-201ENST00000285199 A8MUI8 341 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 MCF2LO15068 1137 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
USP43-201ENST00000285199 CPP00450 1065 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 BPIFB4P59827 614 aa16.69■□□□□ 0.26
USP43-201ENST00000285199 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms