RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 GOLGA8JA6NMD2 632 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 BECN2A8MW95 431 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 ZNF18P17022 549 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 NCBP1Q09161 790 aaKnown RBP23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 MYBPC2Q14324 1141 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 ZNF568Q3ZCX4 644 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 CDKAL1Q5VV42 579 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 CRELD2Q6UXH1 353 aaPredicted RBP23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 RTN4RL1Q86UN2 441 aaPredicted RBP23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 RDH13Q8NBN7 331 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 DBF4BQ8NFT6 615 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 FBXL18Q96ME1 805 aa23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 AGO2Q9UKV8 859 aaKnown RBP23.81■■□□□ 1.4
PDLIM3-203ENST00000284771 SMTNL1A8MU46 457 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 CXCL10P02778 98 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 HARSP12081 509 aaKnown RBP23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 RAG1P15918 1043 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 DSC3Q14574 896 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 NOLC1Q14978 699 aaKnown RBP eCLIP23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 SLC27A1Q6PCB7 646 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 XXYLT1Q8NBI6 393 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 MSTO1Q9BUK6 570 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 CHST12Q9NRB3 414 aa23.8■■□□□ 1.4
PDLIM3-203ENST00000284771 N4BP3O15049 544 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 CETN3O15182 167 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 ATP1A3P13637 1013 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 RPL13P26373 211 aaKnown RBP23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 TNFSF9P41273 254 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 MATR3P43243 847 aaKnown RBP eCLIP23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 ACOT2P49753 483 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 TPD52L1Q16890 204 aaPredicted RBP23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 CBWD2Q8IUF1 395 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 TMEM192Q8IY95 271 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 EXOC3O60645 756 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 CEP135Q66GS9 1140 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 FILIP1Q7Z7B0 1213 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 DEFB128Q7Z7B8 93 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 THNSL1Q8IYQ7 743 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 C7orf61Q8IZ16 206 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 GPD1LQ8N335 351 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 BORCS6Q96GS4 357 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 CEP63Q96MT8 703 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 FAM213AQ9BRX8 229 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 THAP9Q9H5L6 903 aa23.79■■□□□ 1.4
PDLIM3-203ENST00000284771 PARNO95453 639 aaKnown RBP23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 NPTXRO95502 500 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 MCF2P10911 925 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 CSF2RAP15509 400 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 TWF2Q6IBS0 349 aaKnown RBP23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 MFSD5Q6N075 450 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 LINC01599Q8WXQ3 324 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 ADAM2Q99965 735 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 HTATIP2Q9BUP3 242 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 HES2Q9Y543 173 aa23.78■■□□□ 1.4
PDLIM3-203ENST00000284771 OGTO15294 1046 aa23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 MEFVO15553 781 aaPredicted RBP23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 EXTL3O43909 919 aa23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 ADRB2P07550 413 aa23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 OSTNP61366 133 aa23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 SNRNP35Q16560 246 aaKnown RBP23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 NOC3LQ8WTT2 800 aaKnown RBP23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 ADPGKQ9BRR6 497 aa23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 CPSF3Q9UKF6 684 aaKnown RBP23.77■■□□□ 1.4
PDLIM3-203ENST00000284771 ZSCAN20P17040 1043 aaPredicted RBP23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 WNT7BP56706 349 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 SMG8Q8ND04 991 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 RNF39Q9H2S5 420 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 NXF3Q9H4D5 531 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 KIAA0391O15091 583 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 EVI5O60447 810 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 PSMC2P35998 433 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 PLEKHO2Q8TD55 490 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 CCDC51Q96ER9 411 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 CNOT6LQ96LI5 555 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 MKNK1Q9BUB5 465 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 TRAIPQ9BWF2 469 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 FAM105AQ9NUU6 356 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 FRMD4BQ9Y2L6 1034 aa23.76■■□□□ 1.39
PDLIM3-203ENST00000284771 FSD2A1L4K1 749 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 GOLGA6L19H0YKK7 550 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 LDHAP00338 332 aaKnown RBP23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 STAG3L1P0CL83 205 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 SYN1P17600 705 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 MARSP56192 900 aaKnown RBP23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 DCAF4L1Q3SXM0 396 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 TCP11X2Q5H9J9 407 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 APTXQ7Z2E3 356 aaKnown RBP23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 CREBRFQ8IUR6 639 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 RGS18Q9NS28 235 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 IPPQ9Y573 584 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 PCDHB2Q9Y5E7 798 aa23.75■■□□□ 1.39
PDLIM3-203ENST00000284771 MEIS3P2A8K0S8 358 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 KCNJ18B7U540 433 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 SLC16A3O15427 465 aaKnown RBP23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 FGFR1OPO95684 399 aaKnown RBP23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 KCNJ12Q14500 433 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 FAM186BQ8IYM0 893 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 SEPT8Q92599 483 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 BADQ92934 168 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 MFSD14AQ96MC6 490 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms