RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 RAB20Q9NX57 234 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 LTBP4Q8N2S1 1624 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 PI4K2BG5E9Z4 385 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 CCDC188H7C350 402 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 MIS18BP1Q6P0N0 1132 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 DAW1Q8N136 415 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 NEK9Q8TD19 979 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 LPAR1Q92633 364 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 INPP4AQ96PE3 977 aaPredicted RBP12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 ATP6V0A4Q9HBG4 840 aa12.74□□□□□ -0.37
SLC13A3-201ENST00000279027 FRMD3A2A2Y4 597 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 DKC1O60832 514 aaKnown RBP eCLIP12.73□□□□□ -0.373e-10■■■■■ 56
SLC13A3-201ENST00000279027 GJB6O95452 261 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 TMEM253P0C7T8 217 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 FLT3P36888 993 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CNTN2Q02246 1040 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CYP4F22Q6NT55 531 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 ATG4AQ8WYN0 398 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 SIX2Q9NPC8 291 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 AGPSO00116 658 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CSDE1O75534 798 aaKnown RBP12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 GUCY2CP25092 1073 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 LIN9Q5TKA1 542 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 MDM1Q8TC05 714 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 ACSF2Q96CM8 615 aaPredicted RBP12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 FAM114A2Q9NRY5 505 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CSADQ9Y600 493 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CCNE2O96020 404 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 ZNF662Q6ZS27 426 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 LRRC71Q8N4P6 559 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CABS1Q96KC9 395 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 TELO2Q9Y4R8 837 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 CAPN7Q9Y6W3 813 aa12.73□□□□□ -0.37
SLC13A3-201ENST00000279027 ACTR2P61160 394 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 MTMR3Q13615 1198 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 CUL1Q13616 776 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 SV2AQ7L0J3 742 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 NOP9Q86U38 636 aaKnown RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 AGO2Q9UKV8 859 aaKnown RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 TTC7AQ9ULT0 858 aaPredicted RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 VWA5AO00534 786 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 LCA5LO95447 670 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 SCP2P22307 547 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 CCDC121Q6ZUS5 278 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 GPD1LQ8N335 351 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 ATP6V1G3Q96LB4 118 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 ZNF302Q9NR11 478 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 SUCLA2Q9P2R7 463 aaPredicted RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 BACE1P56817 501 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 RWDD2BP57060 319 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 ADAM22Q9P0K1 906 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 RTN2O75298 545 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 SFNP31947 248 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 STXBP2Q15833 593 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 PCNX4Q63HM2 1172 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 MICALCLQ6ZW33 695 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 FAM83AQ86UY5 434 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 ISCUQ9H1K1 167 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 SLC38A10Q9HBR0 1119 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 RBAKQ9NYW8 714 aaPredicted RBP12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 FAM169AQ9Y6X4 670 aa12.72□□□□□ -0.37
SLC13A3-201ENST00000279027 PIK3R2O00459 728 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 ORC1Q13415 861 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 SEPT7Q16181 437 aaKnown RBP12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 SRLQ86TD4 932 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 JAMLQ86YT9 394 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 ALG3Q92685 438 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 SEMA4DQ92854 862 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 ZNF148Q9UQR1 794 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 MNAT1P51948 309 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 ALCAMQ13740 583 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 LRRC14Q15048 493 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 UAP1Q16222 522 aaPredicted RBP12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 ANO5Q75V66 913 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 CCDC60Q8IWA6 550 aaPredicted RBP12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 CD2APQ9Y5K6 639 aa12.71□□□□□ -0.37
SLC13A3-201ENST00000279027 ECEL1O95672 775 aa12.71□□□□□ -0.38
SLC13A3-201ENST00000279027 TMEM191BP0C7N4 346 aa12.71□□□□□ -0.38
SLC13A3-201ENST00000279027 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms