RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 APBA2Q99767 749 aa23.94■■□□□ 1.42
CCDC7-201ENST00000277657 TSGA10Q9BZW7 698 aa23.94■■□□□ 1.42
CCDC7-201ENST00000277657 A6NJR5 290 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 TMEM88BA6NKF7 163 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 CA12O43570 354 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 FERP16591 822 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 ANXA13P27216 316 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 SOX5P35711 763 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 IGBP1P78318 339 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 POU5F1BQ06416 359 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 KIF5AQ12840 1032 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 MAPK6Q16659 721 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 FMNL3Q8IVF7 1028 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 MSTO1Q9BUK6 570 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 NFKBIZQ9BYH8 718 aa23.93■■□□□ 1.42
CCDC7-201ENST00000277657 TTLL13PA6NNM8 815 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 PJA2O43164 708 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 CTIFO43310 598 aaKnown RBP23.92■■□□□ 1.42
CCDC7-201ENST00000277657 TOM1L1O75674 476 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 PRKCBP05771 671 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 GJB1P08034 283 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 PTENP60484 403 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 MAP2K1Q02750 393 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-201ENST00000277657 ZNF571Q7Z3V5 609 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-201ENST00000277657 SLC35F6Q8N357 371 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 ACO2Q99798 780 aaKnown RBP23.92■■□□□ 1.42
CCDC7-201ENST00000277657 FZD8Q9H461 694 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 TOPORSQ9NS56 1045 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-201ENST00000277657 ANKFY1Q9P2R3 1169 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 ZSWIM8A7E2V4 1837 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 TNPO2O14787 897 aaKnown RBP23.92■■□□□ 1.42
CCDC7-201ENST00000277657 LRRN2O75325 713 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 CYP2B6P20813 491 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 CYP2C19P33261 490 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 MAGEA1P43355 309 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 GPC3P51654 580 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 C15orf39Q6ZRI6 1047 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 VTI1AQ96AJ9 217 aa23.92■■□□□ 1.42
CCDC7-201ENST00000277657 A0A087X0T9 212 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 FAM228BP0C875 321 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 DLATP10515 647 aaKnown RBP23.91■■□□□ 1.42
CCDC7-201ENST00000277657 ACOT2P49753 483 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 SV2AQ7L0J3 742 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 ARHGEF19Q8IW93 802 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 SEMA4DQ92854 862 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 NLRP4Q96MN2 994 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 ADAMTS1Q9UHI8 967 aa23.91■■□□□ 1.42
CCDC7-201ENST00000277657 ACKR2O00590 384 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 ABLIM1O14639 778 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 CLDN3O15551 220 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 DYNC1LI2O43237 492 aaPredicted RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 FAM189A1O60320 539 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 EVI5O60447 810 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 URI1O94763 535 aaPredicted RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 GFPT2O94808 682 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 PNMA6AP0CW24 399 aaPredicted RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 CTGFP29279 349 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 MTHFD1LQ6UB35 978 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 TXLNBQ8N3L3 684 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 FBXL13Q8NEE6 735 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 UBE2TQ9NPD8 197 aaPredicted RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 DUSP10Q9Y6W6 482 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 MGAMO43451 1857 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 MBTD1Q05BQ5 628 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 PPFIA1Q13136 1202 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 ENOX2Q16206 610 aaKnown RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 ZBTB41Q5SVQ8 909 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 IFNLR1Q8IU57 520 aaPredicted RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 TAS1R2Q8TE23 839 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 ZNF516Q92618 1163 aa23.9■■□□□ 1.42
CCDC7-201ENST00000277657 RBAKQ9NYW8 714 aaPredicted RBP23.9■■□□□ 1.42
CCDC7-201ENST00000277657 DYNC1I1O14576 645 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 PROZP22891 400 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 MATR3P43243 847 aaKnown RBP eCLIP23.89■■□□□ 1.41
CCDC7-201ENST00000277657 WNT7BP56706 349 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 MCL1Q07820 350 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 GRIK4Q16099 956 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 MARCH8Q5T0T0 291 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 TSHZ1Q6ZSZ6 1077 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 TLK2Q86UE8 772 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 IFT122Q9HBG6 1241 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 LUC7LQ9NQ29 371 aaKnown RBP23.89■■□□□ 1.41
CCDC7-201ENST00000277657 RAB20Q9NX57 234 aa23.89■■□□□ 1.41
CCDC7-201ENST00000277657 CTAGE9A4FU28 777 aa23.88■■□□□ 1.41
CCDC7-201ENST00000277657 TMOD1P28289 359 aa23.88■■□□□ 1.41
CCDC7-201ENST00000277657 FNBP1Q96RU3 617 aa23.88■■□□□ 1.41
CCDC7-201ENST00000277657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.88■■□□□ 1.41
CCDC7-201ENST00000277657 PTPRHQ9HD43 1115 aa23.88■■□□□ 1.41
CCDC7-201ENST00000277657 NENFQ9UMX5 172 aa23.88■■□□□ 1.41
CCDC7-201ENST00000277657 CNTNAP2Q9UHC6 1331 aa23.88■■□□□ 1.41
CCDC7-201ENST00000277657 FOXN3O00409 490 aaPredicted RBP23.87■■□□□ 1.41
CCDC7-201ENST00000277657 SLU7O95391 586 aaKnown RBP23.87■■□□□ 1.41
CCDC7-201ENST00000277657 F2P00734 622 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 CCDC172P0C7W6 258 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 ARHGAP44Q17R89 818 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 C10orf76Q5T2E6 689 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 SYT11Q9BT88 431 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 MINDY3Q9H8M7 445 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 PDE11AQ9HCR9 933 aa23.87■■□□□ 1.41
CCDC7-201ENST00000277657 Q9Y3F1 56 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms