RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 IFI16Q16666 785 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 MEI1Q5TIA1 1274 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TAPT1Q6NXT6 567 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 ARMCX2Q7L311 632 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 ABRAQ8N0Z2 381 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 C2orf69Q8N8R5 385 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 FBXL13Q8NEE6 735 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 COG1Q8WTW3 980 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TCP11Q8WWU5 503 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 KAT5Q92993 513 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 KREMEN1Q96MU8 473 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 AGPAT1Q99943 283 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TARS2Q9BW92 718 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 RAB21Q9UL25 225 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 MYH10P35580 1976 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 A0A0B4J269 797 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 GRID2IPA4D2P6 1211 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 GAS2O43903 313 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 RHOXF2BP0C7M4 288 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 DLATP10515 647 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 ADORA2AP29274 412 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 EFNA5P52803 228 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 MFAP3P55082 362 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 PRPF4BQ13523 1007 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 SPRYD7Q5W111 196 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 NFRKBQ6P4R8 1299 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TMCO3Q6UWJ1 677 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 CRELD2Q6UXH1 353 aaPredicted RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 C15orf39Q6ZRI6 1047 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF572Q7Z3I7 529 aaPredicted RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 PPM1KQ8N3J5 372 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TAS1R2Q8TE23 839 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 RHOXF2Q9BQY4 288 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 SUGCTQ9HAC7 445 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 RRAGCQ9HB90 399 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 RBM47A0AV96 593 aaKnown RBP10.36□□□□□ -0.75
TRIM55-201ENST00000276573 HBP1O60381 514 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 ZRANB2O95218 330 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM55-201ENST00000276573 FTCDO95954 541 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 EDN1P05305 212 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 ACOT2P49753 483 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 NLRP11P59045 1033 aaKnown RBP10.36□□□□□ -0.75
TRIM55-201ENST00000276573 ARHGAP1Q07960 439 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 LAMTOR4Q0VGL1 99 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 MXD4Q14582 209 aaPredicted RBP10.36□□□□□ -0.75
TRIM55-201ENST00000276573 BRD3Q15059 726 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 MAMDC4Q6UXC1 1216 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 FAM71AQ8IYT1 594 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 SHC3Q92529 594 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 TATDN2Q93075 761 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 NT5C1BQ96P26 610 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 PNKPQ96T60 521 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
TRIM55-201ENST00000276573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM55-201ENST00000276573 OGFRQ9NZT2 677 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 ADGRA2Q96PE1 1338 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 UTRNP46939 3433 aa10.36□□□□□ -0.75
TRIM55-201ENST00000276573 CELF2O95319 508 aaKnown RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 SGPL1O95470 568 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 C4BPAP04003 597 aaKnown RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TUBBP07437 444 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TMEM253P0C7T8 217 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 SRGAP2CP0DJJ0 459 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 CXCR5P32302 372 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 USP8P40818 1118 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ITIH3Q06033 890 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 CC2D1AQ6P1N0 951 aaPredicted RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ZPBP2Q6X784 338 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 LRRC57Q8N9N7 239 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TPCN2Q8NHX9 752 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 FNBP1Q96RU3 617 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ARID3AQ99856 593 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 PTPN18Q99952 460 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 VTA1Q9NP79 307 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 FAM53CQ9NYF3 392 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 RNF14Q9UBS8 474 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 IVNS1ABPQ9Y6Y0 642 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TMCO5BA8MYB1 307 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ATP8B1O43520 1251 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 MSCO60682 206 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ZC3H11AO75152 810 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 SEC31AO94979 1220 aaKnown RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 GH1P01241 217 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ZBTB48P10074 688 aaPredicted RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 CHRNB2P17787 502 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TNNI1P19237 187 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 PAFAH1B1P43034 410 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms