RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CCNCP24863 283 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 RASGRF1Q13972 1273 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 EFR3AQ14156 821 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 UGP2Q16851 508 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PGBD3Q8N328 593 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 MYL10Q9BUA6 226 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 APOL1O14791 398 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PGM3O95394 542 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 POLR2EP19388 210 aaKnown RBP14□□□□□ -0.17
PRDM16-201ENST00000270722 CNGA3Q16281 694 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 SRLQ86TD4 932 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PDCD6IPQ8WUM4 868 aaKnown RBP14□□□□□ -0.17
PRDM16-201ENST00000270722 ABCF3Q9NUQ8 709 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 ANKARQ7Z5J8 1434 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 GYG1P46976 350 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 PUDPQ08623 228 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 CHAMP1Q96JM3 812 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
PRDM16-201ENST00000270722 SLC20A2Q08357 652 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 TMEM132BQ14DG7 1078 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 S100A6P06703 90 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 BBS9Q3SYG4 887 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 LRRC8EQ6NSJ5 796 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 CAPN12Q6ZSI9 719 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 DNAJC7Q99615 494 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 A8MXQ7 604 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SERPING1P05155 500 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 PNOCQ13519 176 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 ANO4Q32M45 955 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 PREPLQ4J6C6 727 aaPredicted RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 XPO4Q9C0E2 1151 aaKnown RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SLC38A7Q9NVC3 462 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 EFNA5P52803 228 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SPICE1Q8N0Z3 855 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 VPS37AQ8NEZ2 397 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 DPH5Q9H2P9 285 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 PEX14O75381 377 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 MYBL1P10243 752 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 ESRRAP11474 423 aaPredicted RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 KRT20P35900 424 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 PAPOLBQ9NRJ5 636 aaKnown RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SERPINB4P48594 390 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 ZBTB10Q96DT7 871 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 TSPAN17Q96FV3 270 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 MRPL48Q96GC5 212 aaKnown RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 RUBCNLQ9H714 662 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 CDK17Q00537 523 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SPARCL1Q14515 664 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 SIX5Q8N196 739 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 BTBD6Q96KE9 485 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 KRCC1Q9NPI7 259 aaPredicted RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.99□□□□□ -0.17
PRDM16-201ENST00000270722 AIPL1Q9NZN9 384 aa13.99□□□□□ -0.17
PRDM16-201ENST00000270722 DNALI1O14645 258 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 NCF2P19878 526 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 MAN1C1Q9NR34 630 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 FAM47E-STBD1D6RA91 191 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 SLFN14P0C7P3 912 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 ETF1P62495 437 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 C16orf62Q7Z3J2 963 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 ZWILCHQ9H900 591 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 MAP1BP46821 2468 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 SERPINB8P50452 374 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 CENPPQ6IPU0 288 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 PLD3Q8IV08 490 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 MAP3K13O43283 966 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 ARHGAP15Q53QZ3 475 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 SKA1Q96BD8 255 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 OXCT2Q9BYC2 517 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 MRPL4Q9BYD3 311 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 Q4G0T1 1027 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 CYP4F22Q6NT55 531 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 TBC1D1Q86TI0 1168 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 TIPINQ9BVW5 301 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 COPEO14579 308 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 IL12RB1P42701 662 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 HEATR6Q6AI08 1181 aaKnown RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 PIGUQ9H490 435 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 UBE2TQ9NPD8 197 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-201ENST00000270722 CEP95Q96GE4 821 aa13.98□□□□□ -0.17
PRDM16-201ENST00000270722 ADCY9O60503 1353 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 POTECB2RU33 542 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 CCND1P24385 295 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF568Q3ZCX4 644 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 KRT78Q8N1N4 520 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms