RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TIPINQ9BVW5 301 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 KCTD10Q9H3F6 313 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 TMX1Q9H3N1 280 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 CYP26B1Q9NR63 512 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 ST3GAL5Q9UNP4 418 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 RALGAPA2Q2PPJ7 1873 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 COL4A6Q14031 1691 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 LRMPQ12912 555 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 SCLT1Q96NL6 688 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 JPH2Q9BR39 696 aaPredicted RBP26.92■■□□□ 1.9
SSBP4-201ENST00000270061 ADAMTS10Q9H324 1103 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 TAB2Q9NYJ8 693 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 VCANP13611 3396 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 ITIH6Q6UXX5 1313 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 IGKV6-21A0A0C4DH24 114 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 MAFO75444 373 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-201ENST00000270061 CLCN1P35523 988 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 GPC3P51654 580 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 DRP2Q13474 957 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 ARID5BQ14865 1188 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 ARMCX5Q6P1M9 558 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 FAM228AQ86W67 206 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 KIAA1524Q8TCG1 905 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 ZNF507Q8TCN5 953 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 PPM1EQ8WY54 764 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 CEP170P1Q96L14 293 aa26.91■■□□□ 1.9
SSBP4-201ENST00000270061 NPEPPSP55786 919 aa26.9■■□□□ 1.9
SSBP4-201ENST00000270061 FKBP3Q00688 224 aaKnown RBP26.9■■□□□ 1.9
SSBP4-201ENST00000270061 LRRC55Q6ZSA7 311 aa26.9■■□□□ 1.9
SSBP4-201ENST00000270061 OTUD6AQ7L8S5 288 aa26.9■■□□□ 1.9
SSBP4-201ENST00000270061 ZC3H3Q8IXZ2 948 aaKnown RBP26.9■■□□□ 1.9
SSBP4-201ENST00000270061 CNOT6LQ96LI5 555 aaKnown RBP26.9■■□□□ 1.9
SSBP4-201ENST00000270061 VPS16Q9H269 839 aa26.9■■□□□ 1.9
SSBP4-201ENST00000270061 PPME1Q9Y570 386 aa26.9■■□□□ 1.9
SSBP4-201ENST00000270061 DENND3A2RUS2 1198 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 EIF3DO15371 548 aaKnown RBP eCLIP26.89■■□□□ 1.9
SSBP4-201ENST00000270061 SFPQP23246 707 aaKnown RBP eCLIP26.89■■□□□ 1.9
SSBP4-201ENST00000270061 EIF4BP23588 611 aaKnown RBP26.89■■□□□ 1.9
SSBP4-201ENST00000270061 CASP5P51878 434 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 CDC42EP1Q00587 391 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 EDRF1Q3B7T1 1238 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 MYCT1Q8N699 235 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 NLRP7Q8WX94 980 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 SLC7A3Q8WY07 619 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 ZNF668Q96K58 619 aaPredicted RBP26.89■■□□□ 1.9
SSBP4-201ENST00000270061 CEP63Q96MT8 703 aa26.89■■□□□ 1.9
SSBP4-201ENST00000270061 MRPL44Q9H9J2 332 aaKnown RBP26.89■■□□□ 1.9
SSBP4-201ENST00000270061 SPTBN5Q9NRC6 3674 aaKnown RBP26.89■■□□□ 1.9
SSBP4-201ENST00000270061 LGALS16A8MUM7 142 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 MAPK7Q13164 816 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 KNOP1Q1ED39 458 aaKnown RBP26.89■■□□□ 1.89
SSBP4-201ENST00000270061 NPAS4Q8IUM7 802 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 EXOC8Q8IYI6 725 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 TUBGCP2Q9BSJ2 902 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 C17orf80Q9BSJ5 609 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 PYCARDQ9ULZ3 195 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 TRAF3IP3Q9Y228 551 aa26.89■■□□□ 1.89
SSBP4-201ENST00000270061 STAG3L1P0CL83 205 aa26.88■■□□□ 1.89
SSBP4-201ENST00000270061 POU3F3P20264 500 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-201ENST00000270061 CCZ1BP86790 482 aa26.88■■□□□ 1.89
SSBP4-201ENST00000270061 CCZ1P86791 482 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-201ENST00000270061 CCDC85BQ15834 202 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-201ENST00000270061 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.88■■□□□ 1.892e-6■■■■□ 19.6
SSBP4-201ENST00000270061 FIZ1Q96SL8 496 aa26.88■■□□□ 1.89
SSBP4-201ENST00000270061 ADAM2Q99965 735 aa26.88■■□□□ 1.89
SSBP4-201ENST00000270061 SUCLA2Q9P2R7 463 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-201ENST00000270061 UBE4BO95155 1302 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 ADGRA3Q8IWK6 1321 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 SFI1A8K8P3 1242 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 MGEA5O60502 916 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 TPM2P07951 284 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 MAPTP10636 758 aaKnown RBP26.87■■□□□ 1.89
SSBP4-201ENST00000270061 POLGP54098 1239 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-201ENST00000270061 CREBRFQ8IUR6 639 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 MICALL1Q8N3F8 863 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 GDPD5Q8WTR4 605 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 SAMD11Q96NU1 681 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 MTCH2Q9Y6C9 303 aa26.87■■□□□ 1.89
SSBP4-201ENST00000270061 XIRP2A4UGR9 3374 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 PDXKO00764 312 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 HIP1RO75146 1068 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 DGKIO75912 1065 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 MYBP10242 640 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 DARSP14868 501 aaKnown RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 XKR9Q5GH70 373 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 RHPN2Q8IUC4 686 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 NELFCDQ8IXH7 590 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 DAW1Q8N136 415 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 CRIPAKQ8N1N5 446 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 FIBCD1Q8N539 461 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 FBXO22Q8NEZ5 403 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 DHX33Q9H6R0 707 aaKnown RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 RC3H2Q9HBD1 1191 aaKnown RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 RGS18Q9NS28 235 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 C1orf112Q9NSG2 853 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 LRFN2Q9ULH4 789 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 FNDC1Q4ZHG4 1894 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 A0A1W2PQC6 194 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 LPXNO60711 386 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 GCNT3O95395 438 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms