RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 GIMAP7Q8NHV1 300 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 TMEM117Q9H0C3 514 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 CDC42EP4Q9H3Q1 356 aaKnown RBP18.04■□□□□ 0.48
SQLE-201ENST00000265896 HSPBP1Q9NZL4 362 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 PFASO15067 1338 aa18.04■□□□□ 0.48
SQLE-201ENST00000265896 NFIBO00712 420 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 TBX3O15119 743 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 SKAP2O75563 359 aaPredicted RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 UBOX5O94941 541 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 MYCLP12524 364 aaPredicted RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 PSMC4P43686 418 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 AUHQ13825 339 aaKnown RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 UGCGQ16739 394 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 C1orf220Q5T0J3 134 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 CYP4F22Q6NT55 531 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 RNF207Q6ZRF8 634 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 CYP4X1Q8N118 509 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 EPS8L1Q8TE68 723 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 ACSF2Q96CM8 615 aaPredicted RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 NACC1Q96RE7 527 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 COL20A1Q9P218 1284 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 RASAL2Q9UJF2 1139 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 R3HDM2Q9Y2K5 976 aaKnown RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 NCANO14594 1321 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 MMP10P09238 476 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 MXI1P50539 228 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 KRT17Q04695 432 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 MIER3Q7Z3K6 550 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 SGSM3Q96HU1 749 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 ZDHHC15Q96MV8 337 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 GLT8D2Q9H1C3 349 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.03■□□□□ 0.48
SQLE-201ENST00000265896 SAMD15Q9P1V8 674 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 ODF2LQ9ULJ1 636 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 WNK3Q9BYP7 1800 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 TMEM120BA0PK00 339 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 UPP2O95045 317 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 COILP38432 576 aaPredicted RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 SPP2Q13103 211 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 MPP2Q14168 576 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 SWT1Q5T5J6 900 aaKnown RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 TAS1R2Q8TE23 839 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 ARHGEF2Q92974 986 aaKnown RBP18.03■□□□□ 0.48
SQLE-201ENST00000265896 STAMBPL1Q96FJ0 436 aa18.03■□□□□ 0.48
SQLE-201ENST00000265896 BTAF1O14981 1849 aa18.02■□□□□ 0.48
SQLE-201ENST00000265896 FRMPD4Q14CM0 1322 aa18.02■□□□□ 0.48
SQLE-201ENST00000265896 BHMG1C9JSJ3 638 aaPredicted RBP18.02■□□□□ 0.48
SQLE-201ENST00000265896 PEX5P50542 639 aa18.02■□□□□ 0.48
SQLE-201ENST00000265896 SGO2Q562F6 1265 aa18.02■□□□□ 0.48
SQLE-201ENST00000265896 SLC13A5Q86YT5 568 aaPredicted RBP18.02■□□□□ 0.48
SQLE-201ENST00000265896 MTRF1LQ9UGC7 380 aaKnown RBP18.02■□□□□ 0.48
SQLE-201ENST00000265896 ANAPC7Q9UJX3 599 aa18.02■□□□□ 0.48
SQLE-201ENST00000265896 ZHX2Q9Y6X8 837 aa18.02■□□□□ 0.48
SQLE-201ENST00000265896 GTPBP10A4D1E9 387 aaKnown RBP18.02■□□□□ 0.47
SQLE-201ENST00000265896 TOM1O60784 492 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 RAD17O75943 681 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 CFHP08603 1231 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 CIITAP33076 1130 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 POMGNT1Q8WZA1 660 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 SLC5A5Q92911 643 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 KCNH7Q9NS40 1196 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 DMAC2Q9NW81 257 aa18.02■□□□□ 0.47
SQLE-201ENST00000265896 MYH11P35749 1972 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 MMP13P45452 471 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 ELF3P78545 371 aaPredicted RBP18.01■□□□□ 0.47
SQLE-201ENST00000265896 KAZNQ674X7 775 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 SRRM1Q8IYB3 904 aaKnown RBP18.01■□□□□ 0.47
SQLE-201ENST00000265896 HAUS1Q96CS2 278 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 INTUQ9ULD6 942 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 TTC7AQ9ULT0 858 aaPredicted RBP18.01■□□□□ 0.47
SQLE-201ENST00000265896 EIF3DO15371 548 aaKnown RBP eCLIP18.01■□□□□ 0.47
SQLE-201ENST00000265896 SPAG7O75391 227 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 CETPP11597 493 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 CALCOCO2Q13137 446 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 SCARA3Q6AZY7 606 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 SPOPLQ6IQ16 392 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 MOXD1Q6UVY6 613 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 HAUS6Q7Z4H7 955 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 CCDC63Q8NA47 563 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 SPOCK2Q92563 424 aa18.01■□□□□ 0.47
SQLE-201ENST00000265896 NAP1L3Q99457 506 aaPredicted RBP18.01■□□□□ 0.47
SQLE-201ENST00000265896 PI4K2BG5E9Z4 385 aa18■□□□□ 0.47
SQLE-201ENST00000265896 FMO1Q01740 532 aa18■□□□□ 0.47
SQLE-201ENST00000265896 MYO1EQ12965 1108 aa18■□□□□ 0.47
SQLE-201ENST00000265896 RASA3Q14644 834 aa18■□□□□ 0.47
SQLE-201ENST00000265896 KIF22Q14807 665 aa18■□□□□ 0.47
SQLE-201ENST00000265896 TATDN1Q6P1N9 297 aa18■□□□□ 0.47
SQLE-201ENST00000265896 LDHDQ86WU2 507 aa18■□□□□ 0.47
SQLE-201ENST00000265896 ANKS4BQ8N8V4 417 aa18■□□□□ 0.47
SQLE-201ENST00000265896 TEKT3Q9BXF9 490 aa18■□□□□ 0.47
SQLE-201ENST00000265896 DACT2Q5SW24 774 aa18■□□□□ 0.47
SQLE-201ENST00000265896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18■□□□□ 0.47
SQLE-201ENST00000265896 PAGR1Q9BTK6 254 aa18■□□□□ 0.47
SQLE-201ENST00000265896 TMEM39BQ9GZU3 492 aa18■□□□□ 0.47
SQLE-201ENST00000265896 SYNGAP1Q96PV0 1343 aa18■□□□□ 0.47
SQLE-201ENST00000265896 CCDC172P0C7W6 258 aa18■□□□□ 0.47
SQLE-201ENST00000265896 ALAS1P13196 640 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms