RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 CCDC184Q52MB2 194 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 RUNDC3AQ59EK9 446 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 NBPF15Q8N660 670 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 RFFLQ8WZ73 363 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 KLHL25Q9H0H3 589 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 NCOA5Q9HCD5 579 aaKnown RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 PARVAQ9NVD7 372 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 STAP2Q9UGK3 403 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 LRCH1Q9Y2L9 728 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 CARMIL3Q8ND23 1372 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 SDC4P31431 198 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 VCPP55072 806 aaKnown RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 USHBP1Q8N6Y0 703 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 LRRC59Q96AG4 307 aaKnown RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 TRAPPC9Q96Q05 1148 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 TIPINQ9BVW5 301 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 KRT84Q9NSB2 600 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 ING3Q9NXR8 418 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 ADAM22Q9P0K1 906 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 NFKBIL1Q9UBC1 381 aaPredicted RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 VAV3Q9UKW4 847 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 CCT8L1PA6NM43 557 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 DNALI1O14645 258 aaPredicted RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 RGS4P49798 205 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 TMEM154Q6P9G4 183 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 HIPK4Q8NE63 616 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 ZFYVE19Q96K21 471 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.75□□□□□ -1.49
XRN1-201ENST00000264951 GINS2Q9Y248 185 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 IQGAP2Q13576 1575 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 SERPINB8P50452 374 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 EIF6P56537 245 aaKnown RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 KIF22Q14807 665 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 OTUD7BQ6GQQ9 843 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 PMF1Q6P1K2 205 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 TAF2Q6P1X5 1199 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 FAM47EQ6ZV65 393 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 RHPN2Q8IUC4 686 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 ATP6V1HQ9UI12 483 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 RNF123Q5XPI4 1314 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 NCKAP5LQ9HCH0 1330 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 BTBD18B2RXH4 712 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 SEC31AO94979 1220 aaKnown RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 HADHAP40939 763 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 HIRAP54198 1017 aaPredicted RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 ZNF667Q5HYK9 610 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 ARHGAP17Q68EM7 881 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 DPP10Q8N608 796 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 CCNYL1Q8N7R7 359 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 UHMK1Q8TAS1 419 aaKnown RBP5.75□□□□□ -1.49
XRN1-201ENST00000264951 NGLY1Q96IV0 654 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 PLEKHA5Q9HAU0 1116 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 SLC39A2Q9NP94 309 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 KMT5AQ9NQR1 393 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 RGL1Q9NZL6 768 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 KIAA1024Q9UPX6 916 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 STARD13Q9Y3M8 1113 aa5.75□□□□□ -1.49
XRN1-201ENST00000264951 RFX7Q2KHR2 1363 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 SEMA3DO95025 777 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 HIST1H2AGP0C0S8 130 aaPredicted RBP5.74□□□□□ -1.49
XRN1-201ENST00000264951 HIST1H2ADP20671 130 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 ITGA6P23229 1130 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 ACTR2P61160 394 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 PRAMEP78395 509 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 C2orf54Q08AI8 447 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 RESTQ13127 1097 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 METTL13Q8N6R0 699 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 SSH3Q8TE77 659 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 USP13Q92995 863 aaPredicted RBP5.74□□□□□ -1.49
XRN1-201ENST00000264951 HIST1H2AHQ96KK5 128 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 HIST1H2AJQ99878 128 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 H2AFJQ9BTM1 129 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 AIPL1Q9NZN9 384 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 AURKCQ9UQB9 309 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 PCDHA1Q9Y5I3 950 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 CSADQ9Y600 493 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 PLXNC1O60486 1568 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 PTPRKQ15262 1439 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 TM9SF1O15321 606 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 PSMC3P17980 439 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 CDC42EP1Q00587 391 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 NAA35Q5VZE5 725 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 TRIQKQ629K1 86 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 RFT1Q96AA3 541 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 WDR70Q9NW82 654 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 MAD2L2Q9UI95 211 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 ARHGEF10O15013 1369 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 A0A0B4J269 797 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 RNF103O00237 685 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 MAFGO15525 162 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 COPAP53621 1224 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 TUBB3Q13509 450 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 SPOUT1Q5T280 376 aaKnown RBP5.74□□□□□ -1.49
XRN1-201ENST00000264951 UNC13DQ70J99 1090 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 C16orf71Q8IYS4 520 aaPredicted RBP5.74□□□□□ -1.49
XRN1-201ENST00000264951 FLAD1Q8NFF5 587 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 TRPC4APQ8TEL6 797 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 NSL1Q96IY1 281 aa5.74□□□□□ -1.49
XRN1-201ENST00000264951 UBE2OQ9C0C9 1292 aaKnown RBP5.74□□□□□ -1.49
XRN1-201ENST00000264951 TRABDQ9H4I3 376 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms