RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ATG4AQ8WYN0 398 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 KAT5Q92993 513 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 CD248Q9HCU0 757 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 KLHL14Q9P2G3 628 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 SLC12A3P55017 1021 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 BPIFB4P59827 614 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 LPAR1Q92633 364 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 ARHGEF2Q92974 986 aaKnown RBP21.21■□□□□ 0.99
CSPG5-201ENST00000264723 C9orf72Q96LT7 481 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 FERMT1Q9BQL6 677 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 TEX13BQ9BXU2 312 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 JPH1Q9HDC5 661 aaPredicted RBP21.21■□□□□ 0.99
CSPG5-201ENST00000264723 HSPBP1Q9NZL4 362 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 M0R2N6 131 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 PJA2O43164 708 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 FLT3P36888 993 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 CCDC89Q8N998 374 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 CHMP6Q96FZ7 201 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 ERP44Q9BS26 406 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 SLC9A2Q9UBY0 812 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 SGPL1O95470 568 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 SOX10P56693 466 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 SEC16BQ96JE7 1060 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 ZNF302Q9NR11 478 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 FECHP22830 423 aa21.2■□□□□ 0.98
CSPG5-201ENST00000264723 EIF3BP55884 814 aaKnown RBP21.2■□□□□ 0.98
CSPG5-201ENST00000264723 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.2■□□□□ 0.98
CSPG5-201ENST00000264723 TRIM68Q6AZZ1 485 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 CAVIN3Q969G5 261 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 GMCL1Q96IK5 515 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 SYNGAP1Q96PV0 1343 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 F8VZ95 297 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 WNT10BO00744 389 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 MEIS2O14770 477 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 MXRA7P84157 204 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 C6orf118Q5T5N4 469 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 RHPN2Q8IUC4 686 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 CTAGE3PQ8IX95 158 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
CSPG5-201ENST00000264723 SFNP31947 248 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 CDR2LQ86X02 465 aaPredicted RBP21.19■□□□□ 0.98
CSPG5-201ENST00000264723 RAPGEF5Q92565 580 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 SUCLA2Q9P2R7 463 aaPredicted RBP21.19■□□□□ 0.98
CSPG5-201ENST00000264723 ODF2LQ9ULJ1 636 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 FAM107AO95990 144 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 ALCAMQ13740 583 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 KRT39Q6A163 491 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 SLC17A8Q8NDX2 589 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 EPS8L3Q8TE67 593 aaKnown RBP21.19■□□□□ 0.98
CSPG5-201ENST00000264723 NLRP7Q8WX94 980 aa21.19■□□□□ 0.98
CSPG5-201ENST00000264723 SGK1O00141 431 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 RGL2O15211 777 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 SESN3P58005 492 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 KYNUQ16719 465 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 SYCP2LQ5T4T6 812 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 KDM7AQ6ZMT4 941 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 RBM46Q8TBY0 533 aaKnown RBP21.18■□□□□ 0.98
CSPG5-201ENST00000264723 DHX38Q92620 1227 aaKnown RBP21.18■□□□□ 0.98
CSPG5-201ENST00000264723 RUNDC3BQ96NL0 473 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 SEMA4AQ9H3S1 761 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 KLC4Q9NSK0 619 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 TTLL3Q9Y4R7 772 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 STAM2O75886 525 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 CBWD2Q8IUF1 395 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 RSRC1Q96IZ7 334 aaKnown RBP21.18■□□□□ 0.98
CSPG5-201ENST00000264723 CNOT10Q9H9A5 744 aaKnown RBP21.18■□□□□ 0.98
CSPG5-201ENST00000264723 SUN1O94901 812 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 ZNF449Q6P9G9 518 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 RNF34Q969K3 372 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 IDI2Q9BXS1 227 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 GANQ9H2C0 597 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 TMBIM4Q9HC24 238 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 TOPORSQ9NS56 1045 aaPredicted RBP21.18■□□□□ 0.98
CSPG5-201ENST00000264723 ADAM22Q9P0K1 906 aa21.18■□□□□ 0.98
CSPG5-201ENST00000264723 MYH10P35580 1976 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 MIF4GDA9UHW6 222 aaKnown RBP21.17■□□□□ 0.98
CSPG5-201ENST00000264723 SPAG7O75391 227 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 DGKZQ13574 1117 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 IRF2BP2Q7Z5L9 587 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 KRT35Q92764 455 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 KCTD10Q9H3F6 313 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 LRRD1A4D1F6 860 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 SLITRK3O94933 977 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 TMEM253P0C7T8 217 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 BRAFP15056 766 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 HOXA7P31268 230 aaPredicted RBP21.17■□□□□ 0.98
CSPG5-201ENST00000264723 SLC8A3P57103 927 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 KRT17Q04695 432 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 ZNF844Q08AG5 666 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 SLMAPQ14BN4 828 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 SEZ6Q53EL9 994 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 AGBL3Q8NEM8 1001 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 INPP4AQ96PE3 977 aaPredicted RBP21.17■□□□□ 0.98
CSPG5-201ENST00000264723 TRIM7Q9C029 511 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 PCDHGC5Q9Y5F6 944 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 PODXLO00592 558 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 SLC16A3O15427 465 aaKnown RBP21.17■□□□□ 0.98
CSPG5-201ENST00000264723 RNF8O76064 485 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 ALDH3A1P30838 453 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 DLG4P78352 724 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms