RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ANAPC7Q9UJX3 599 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 AKAP3O75969 853 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 RNF8O76064 485 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 TPBGLP0DKB5 382 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 CCNFP41002 786 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 EPC2Q52LR7 807 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 PALM2Q8IXS6 379 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 ZBED8Q8IZ13 594 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 NUP85Q9BW27 656 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 BRIP1Q9BX63 1249 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 RSPH10B2B2RC85 870 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 ANKRD63C9JTQ0 380 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 CYTH3O43739 400 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 TTLL1O95922 423 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 RSPH10BP0C881 870 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 PYGMP11217 842 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 NMT1P30419 496 aaKnown RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 PSMC4P43686 418 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 UBXN2AP68543 259 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 SMAD1Q15797 465 aaKnown RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 ZC2HC1CQ53FD0 456 aaPredicted RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 SDCCAG8Q86SQ7 713 aaPredicted RBP17.35■□□□□ 0.37
GPC1-201ENST00000264039 ANGPTL2Q9UKU9 493 aa17.35■□□□□ 0.37
GPC1-201ENST00000264039 O00370 1275 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 CCDC22O60826 627 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 FAM200BP0CF97 657 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 CHKAP35790 457 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 PSMC2P35998 433 aaKnown RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 IZUMO3Q5VZ72 239 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 RFWD3Q6PCD5 774 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 LRRC74BQ6ZQY2 392 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 C1orf131Q8NDD1 294 aaKnown RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 CKAP2Q8WWK9 683 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 RBM41Q96IZ5 413 aaKnown RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 ARHGEF3Q9NR81 526 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 ATP8A2Q9NTI2 1148 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 ANAPC4Q9UJX5 808 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 GOLGA8IPA6NC78 632 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 GOLGA8JA6NMD2 632 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 HSPA6P17066 643 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 SLC20A1Q8WUM9 679 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 GRAMD1AQ96CP6 724 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 LCA5LO95447 670 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 PYGBP11216 843 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 ATXN3P54252 364 aaPredicted RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 GPC5P78333 572 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 KCNA1Q09470 495 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 DGKHQ86XP1 1220 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 MYLK4Q86YV6 388 aaPredicted RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 ZNF564Q8TBZ8 553 aaPredicted RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 C12orf65Q9H3J6 166 aaKnown RBP17.34■□□□□ 0.37
GPC1-201ENST00000264039 SH3GLB2Q9NR46 395 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 SLIT1O75093 1534 aa17.34■□□□□ 0.37
GPC1-201ENST00000264039 I3L4J1 428 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 MKRN3Q13064 507 aaKnown RBP17.33■□□□□ 0.37
GPC1-201ENST00000264039 RABGAP1LQ5R372 815 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 ODR4Q5SWX8 454 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 DSTYKQ6XUX3 929 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 PRELID2Q8N945 189 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 MAGEB18Q96M61 343 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 FNBP1Q96RU3 617 aa17.33■□□□□ 0.37
GPC1-201ENST00000264039 FLT1P17948 1338 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 PI4K2BG5E9Z4 385 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 CASP5P51878 434 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 BBS9Q3SYG4 887 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 TRMT10CQ7L0Y3 403 aaKnown RBP17.33■□□□□ 0.36
GPC1-201ENST00000264039 RHOT2Q8IXI1 618 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
GPC1-201ENST00000264039 SH2D3AQ9BRG2 576 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 SUPT3HO75486 399 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 PGM3O95394 542 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 NUDT17P0C025 328 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 GCLCP48506 637 aaPredicted RBP17.33■□□□□ 0.36
GPC1-201ENST00000264039 KIF22Q14807 665 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 STXBP4Q6ZWJ1 553 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 GPR101Q96P66 508 aaPredicted RBP17.33■□□□□ 0.36
GPC1-201ENST00000264039 ANLNQ9NQW6 1124 aa17.33■□□□□ 0.36
GPC1-201ENST00000264039 MIF4GDA9UHW6 222 aaKnown RBP17.32■□□□□ 0.36
GPC1-201ENST00000264039 FOXN3O00409 490 aaPredicted RBP17.32■□□□□ 0.36
GPC1-201ENST00000264039 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
GPC1-201ENST00000264039 IRGCQ6NXR0 463 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 SERPINB12Q96P63 405 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 PEX11AO75192 247 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 NOP14P78316 857 aaKnown RBP17.32■□□□□ 0.36
GPC1-201ENST00000264039 RRP1BQ14684 758 aaKnown RBP17.32■□□□□ 0.36
GPC1-201ENST00000264039 LCA5Q86VQ0 697 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 BICD1Q96G01 975 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 SNF8Q96H20 258 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 CFAP57Q96MR6 1250 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms