RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SUSD6Q92537 303 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 CASP10Q92851 521 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 PNMA5Q96PV4 448 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 KIFC3Q9BVG8 833 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
USE1-201ENST00000263897 PRG3Q9Y2Y8 225 aaPredicted RBP17.73■□□□□ 0.43
USE1-201ENST00000263897 ZMYM2Q9UBW7 1377 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 HIP1RO75146 1068 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 NR1I2O75469 434 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 EDN1P05305 212 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 ALADP13716 330 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 PDCP20941 246 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 PEX3P56589 373 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 NT5DC1Q5TFE4 455 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 EEF1DP3Q658K8 133 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 ADPGKQ9BRR6 497 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 RUSC1Q9BVN2 902 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
USE1-201ENST00000263897 CCDC169A6NNP5 214 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 GPR37L1O60883 481 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 LILRB3O75022 631 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 EFEMP2O95967 443 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 BMP15O95972 392 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 SOD2P04179 222 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
USE1-201ENST00000263897 NPTX2P47972 431 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 MAPK7Q13164 816 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 TPRNQ4KMQ1 711 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 TAS1R1Q7RTX1 841 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 SYT2Q8N9I0 419 aaPredicted RBP17.71■□□□□ 0.43
USE1-201ENST00000263897 SLC22A17Q8WUG5 538 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 AK8Q96MA6 479 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 DRC1Q96MC2 740 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 PLIN2Q99541 437 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 TIPINQ9BVW5 301 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 APOL5Q9BWW9 433 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
USE1-201ENST00000263897 TMEM134Q9H6X4 195 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 C17orf75Q9HAS0 396 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 SNTG2Q9NY99 539 aa17.71■□□□□ 0.43
USE1-201ENST00000263897 SFI1A8K8P3 1242 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 LOC730098B7Z3J9 87 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 DCXO43602 365 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 GUCY2CP25092 1073 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 GRIK3Q13003 919 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 ATF7IP2Q5U623 682 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
USE1-201ENST00000263897 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 KLHL5Q96PQ7 755 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 RPS6KC1Q96S38 1066 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 NTPCRQ9BSD7 190 aaKnown RBP17.7■□□□□ 0.42
USE1-201ENST00000263897 LRFN3Q9BTN0 628 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 C11orf16Q9NQ32 467 aa17.7■□□□□ 0.42
USE1-201ENST00000263897 MRPL17Q9NRX2 175 aaKnown RBP17.7■□□□□ 0.42
USE1-201ENST00000263897 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
USE1-201ENST00000263897 VPS37CA5D8V6 355 aaPredicted RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 F8W810 466 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 SLC26A4O43511 780 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 CNPP09543 421 aaKnown RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 EPCAMP16422 314 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 COL9A1P20849 921 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 ITIH3Q06033 890 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 DMP1Q13316 513 aaPredicted RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 DCAF4L1Q3SXM0 396 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 TMEM119Q4V9L6 283 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 KIAA0319Q5VV43 1072 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 CABP7Q86V35 215 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 PPFIBP1Q86W92 1011 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 RNF135Q8IUD6 432 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 ACO2Q99798 780 aaKnown RBP17.69■□□□□ 0.42
USE1-201ENST00000263897 HERC2P3Q9BVR0 1158 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 EMILIN2Q9BXX0 1053 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 ADAM7Q9H2U9 754 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 KMT5AQ9NQR1 393 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 ARHGAP28Q9P2N2 729 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 KCNG1Q9UIX4 513 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 TNFSF13BQ9Y275 285 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
USE1-201ENST00000263897 PTGESO14684 152 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 RECQL4O94761 1208 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 THP07101 528 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 SYT1P21579 422 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 KLRC2P26717 231 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 UBA7P41226 1012 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 TUSC3Q13454 348 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 CES5AQ6NT32 575 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 TAS1R3Q7RTX0 852 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 APBB1IPQ7Z5R6 666 aaPredicted RBP17.68■□□□□ 0.42
USE1-201ENST00000263897 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms