RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 AKAP5P24588 427 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 MATR3P43243 847 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDF4-201ENST00000263741 OSTNP61366 133 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 CLLU1OSQ5K130 101 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 EPM2AIP1Q7L775 607 aaPredicted RBP20.09■□□□□ 0.81
SDF4-201ENST00000263741 SCFD1Q8WVM8 642 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 LRCH3Q96II8 777 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 TRAIPQ9BWF2 469 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 PTPRHQ9HD43 1115 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 MAPK8IP1Q9UQF2 711 aa20.09■□□□□ 0.81
SDF4-201ENST00000263741 PROZP22891 400 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 RAB27AP51159 221 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 MPZL3Q6UWV2 235 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 AGMOQ6ZNB7 445 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 TMEM192Q8IY95 271 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 SLC17A8Q8NDX2 589 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 HELQQ8TDG4 1101 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 KCNN1Q92952 543 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 SMARCE1Q969G3 411 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 ADPGKQ9BRR6 497 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 INPP5FQ9Y2H2 1132 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 PCDHB13Q9Y5F0 798 aa20.08■□□□□ 0.81
SDF4-201ENST00000263741 DGKIO75912 1065 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 RHOBTB3O94955 611 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 CA3P07451 260 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 STAG3L1P0CL83 205 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 AFF1P51825 1210 aaKnown RBP20.07■□□□□ 0.8
SDF4-201ENST00000263741 LRIT3Q3SXY7 679 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 ZPBP2Q6X784 338 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 SYCP3Q8IZU3 236 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 HVCN1Q96D96 273 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 ACCSQ96QU6 501 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 CXCL16Q9H2A7 254 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 SNTG2Q9NY99 539 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 KLK14Q9P0G3 267 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 HOOK1Q9UJC3 728 aaKnown RBP20.07■□□□□ 0.8
SDF4-201ENST00000263741 BIN1O00499 593 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 TOM1L1O75674 476 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 DNAJB2P25686 324 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 NOLC1Q14978 699 aaKnown RBP eCLIP20.07■□□□□ 0.83e-6■■□□□ 12.8
SDF4-201ENST00000263741 ZBTB41Q5SVQ8 909 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 NKX2-4Q9H2Z4 354 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 CLSTN2Q9H4D0 955 aa20.07■□□□□ 0.8
SDF4-201ENST00000263741 RC3H2Q9HBD1 1191 aaKnown RBP20.07■□□□□ 0.8
SDF4-201ENST00000263741 TBKBP1A7MCY6 615 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 ZNF623O75123 536 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 PIGRP01833 764 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 HTRA4P83105 476 aaPredicted RBP20.06■□□□□ 0.8
SDF4-201ENST00000263741 HABP4Q5JVS0 413 aaKnown RBP20.06■□□□□ 0.8
SDF4-201ENST00000263741 THNSL1Q8IYQ7 743 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 CCDC47Q96A33 483 aaKnown RBP20.06■□□□□ 0.8
SDF4-201ENST00000263741 ZFP42Q96MM3 310 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 ELAC1Q9H777 363 aaKnown RBP20.06■□□□□ 0.8
SDF4-201ENST00000263741 COL4A4P53420 1690 aaPredicted RBP20.06■□□□□ 0.8
SDF4-201ENST00000263741 CLDN3O15551 220 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 ITGA4P13612 1032 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 MLH1P40692 756 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 ALCAMQ13740 583 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 KLHL40Q2TBA0 621 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 DCAF4L1Q3SXM0 396 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 MAN1B1Q9UKM7 699 aa20.06■□□□□ 0.8
SDF4-201ENST00000263741 EIF3DO15371 548 aaKnown RBP eCLIP20.05■□□□□ 0.8
SDF4-201ENST00000263741 RECQL4O94761 1208 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 SMC2O95347 1197 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 KCNB1Q14721 858 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 STXBP4Q6ZWJ1 553 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 MRPL10Q7Z7H8 261 aaKnown RBP20.05■□□□□ 0.8
SDF4-201ENST00000263741 ZSWIM2Q8NEG5 633 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 SPATA20Q8TB22 786 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 ZNF507Q8TCN5 953 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 RAD9AQ99638 391 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 NUP62CLQ9H1M0 184 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 PARP2Q9UGN5 583 aa20.05■□□□□ 0.8
SDF4-201ENST00000263741 EOMESO95936 686 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 SKIP12755 728 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 SCP2P22307 547 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 ADSSP30520 456 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 SMAD3P84022 425 aaKnown RBP20.04■□□□□ 0.8
SDF4-201ENST00000263741 ABI1Q8IZP0 508 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 ZNF689Q96CS4 500 aaPredicted RBP20.04■□□□□ 0.8
SDF4-201ENST00000263741 GAD1Q99259 594 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 CBWD1Q9BRT8 395 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 RSAD1Q9HA92 442 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 EXOC7Q9UPT5 735 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 INSL6Q9Y581 213 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 PCDHA11Q9Y5I1 949 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 PLXNA4Q9HCM2 1894 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 MCF2P10911 925 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 ABCD1P33897 745 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 TNFSF9P41273 254 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 MCL1Q07820 350 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 BTG3Q14201 252 aaPredicted RBP20.04■□□□□ 0.8
SDF4-201ENST00000263741 PGBD4Q96DM1 585 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 CASD1Q96PB1 797 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 GSDMAQ96QA5 445 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 MSTO1Q9BUK6 570 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 MTUS1Q9ULD2 1270 aa20.04■□□□□ 0.8
SDF4-201ENST00000263741 UBE4BO95155 1302 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 TGFB1I1O43294 461 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 PSMD2Q13200 908 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms