RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PTGIRP43119 386 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 MXI1P50539 228 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 AGBL2Q5U5Z8 902 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 CYB5D1Q6P9G0 228 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 KIF2BQ8N4N8 673 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 SYT11Q9BT88 431 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 TMEM117Q9H0C3 514 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 ADAM7Q9H2U9 754 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 TELO2Q9Y4R8 837 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 GTPBP10A4D1E9 387 aaKnown RBP9.8□□□□□ -0.84
MSH4-201ENST00000263187 RASGRF2O14827 1237 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 PHF2O75151 1096 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 PIAS1O75925 651 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 GH1P01241 217 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 ADRA2BP18089 450 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 BAG6P46379 1132 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 KYNUQ16719 465 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 HAUS6Q7Z4H7 955 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 HOOK3Q86VS8 718 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 CCDC50Q8IVM0 306 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 FUKQ8N0W3 1084 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 SLC5A5Q92911 643 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 TUFT1Q9NNX1 390 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 CHST7Q9NS84 486 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 ABCF3Q9NUQ8 709 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 TCEAL9Q9UHQ7 104 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 RASAL2Q9UJF2 1139 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 SUGT1Q9Y2Z0 365 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 NCANO14594 1321 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 EIF4E1BA6NMX2 242 aaKnown RBP9.8□□□□□ -0.84
MSH4-201ENST00000263187 MAP2K2P36507 400 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 CETN1Q12798 172 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 SPP2Q13103 211 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 C1orf220Q5T0J3 134 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 ERMARDQ5T6L9 678 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 RNF207Q6ZRF8 634 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 STXBP4Q6ZWJ1 553 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 PODNQ7Z5L7 613 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 CCDC197Q8NCU1 140 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 GMCL1P1Q8NEA9 526 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 TAS1R2Q8TE23 839 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 EPS8L1Q8TE68 723 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 NAP1L3Q99457 506 aaPredicted RBP9.8□□□□□ -0.84
MSH4-201ENST00000263187 HERPUD2Q9BSE4 406 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 FGFR1OP2Q9NVK5 253 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 DMAC2Q9NW81 257 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 INTUQ9ULD6 942 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 CCPG1Q9ULG6 757 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 MYH11P35749 1972 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 FRMPD4Q14CM0 1322 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 CCDC172P0C7W6 258 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 PARP9Q8IXQ6 854 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 FAM129AQ9BZQ8 928 aa9.8□□□□□ -0.84
MSH4-201ENST00000263187 TPX2Q9ULW0 747 aaKnown RBP9.8□□□□□ -0.84
MSH4-201ENST00000263187 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 TCP11X1B4DZS4 312 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 ATP9AO75110 1047 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 COILP38432 576 aaPredicted RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 SMTNP53814 917 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 KRT17Q04695 432 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 PPP2R5CQ13362 524 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 RASA3Q14644 834 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 KIF22Q14807 665 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 SGO2Q562F6 1265 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 XKR9Q5GH70 373 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 FAM228AQ86W67 206 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 SPATS2Q86XZ4 545 aaKnown RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 XXYLT1Q8NBI6 393 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 TLCD1Q96CP7 247 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 ARHGEF10LQ9HCE6 1279 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 RAVER2Q9HCJ3 691 aaKnown RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 LARSQ9P2J5 1176 aaKnown RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 MTRF1LQ9UGC7 380 aaKnown RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 ANAPC7Q9UJX3 599 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 TRIM33Q9UPN9 1127 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 STK38LQ9Y2H1 464 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 RIPK2O43353 540 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 RASSF9O75901 435 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 CDC25CP30307 473 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 PEX5P50542 639 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 CALCOCO2Q13137 446 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 EMC10Q5UCC4 262 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 KAZNQ674X7 775 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 SPOPLQ6IQ16 392 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 CYP4F22Q6NT55 531 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 SLC13A5Q86YT5 568 aaPredicted RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 RHOT2Q8IXI1 618 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 SEC14L1Q92503 715 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 ACSF2Q96CM8 615 aaPredicted RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 C9orf72Q96LT7 481 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 IDI2Q9BXS1 227 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 TXLNGYQ9BZA5 131 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 R3HDM2Q9Y2K5 976 aaKnown RBP9.79□□□□□ -0.84
MSH4-201ENST00000263187 L3MBTL1Q9Y468 752 aa9.79□□□□□ -0.84
MSH4-201ENST00000263187 PPIP5K2O43314 1243 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms