RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 NAA20P61599 178 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 HTRA3P83110 453 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 MED21Q13503 144 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 DGKZQ13574 1117 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 ACAP1Q15027 740 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 SHROOM1Q2M3G4 852 aaPredicted RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 RRAGAQ7L523 313 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 SESTD1Q86VW0 696 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 AGGF1Q8N302 714 aaeCLIP8.92□□□□□ -0.98
LDB3-201ENST00000263066 ATP8A2Q9NTI2 1148 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 CYP39A1Q9NYL5 469 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 ZNF70Q9UC06 446 aaPredicted RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 NKX1-2Q9UD57 310 aaPredicted RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 TBK1Q9UHD2 729 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 ATP10DQ9P241 1426 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 MROH7-TTC4A0A0A0MT08 1334 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 NOL3O60936 208 aaKnown RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 PGM3O95394 542 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 SUPT20HL1Q3ZLR7 823 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 DCAF15Q66K64 600 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 IQCKQ8N0W5 287 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 U2AF1L4Q8WU68 220 aaKnown RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 FMO2Q99518 471 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 DNAI2Q9GZS0 605 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 DDX47Q9H0S4 455 aaKnown RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 ARHGAP10A1A4S6 786 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 CASQ2O14958 399 aaPredicted RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 MAPK13O15264 365 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 MAP3K13O43283 966 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 SCG2P13521 617 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 S100A1P23297 94 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 EPHB2P29323 1055 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 EPHX2P34913 555 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 PHEXP78562 749 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 ATP1A4Q13733 1029 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 KIF22Q14807 665 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 LIN52Q52LA3 116 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 CYB5R4Q7L1T6 521 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 COQ7Q99807 217 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 NOC4LQ9BVI4 516 aaKnown RBP8.92□□□□□ -0.98
LDB3-201ENST00000263066 CUEDC2Q9H467 287 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 EFR3BQ9Y2G0 817 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 TMED5Q9Y3A6 229 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 N6AMT1Q9Y5N5 214 aa8.92□□□□□ -0.98
LDB3-201ENST00000263066 HTR3EA5X5Y0 456 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 RASGRF2O14827 1237 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ATICP31939 592 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 SERPINB6P35237 376 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 TTBK2Q6IQ55 1244 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 IZUMO2Q6UXV1 221 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ANKRD35Q8N283 1001 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ZNF713Q8N859 430 aaPredicted RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 NEK9Q8TD19 979 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 TGS1Q96RS0 853 aaKnown RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 THEGQ9P2T0 379 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 TUBE1Q9UJT0 475 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 TESPA1A2RU30 521 aaPredicted RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 WNT10BO00744 389 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 PSMA7O14818 248 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 RAD51CO43502 376 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 GMNNO75496 209 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 PLEKHA8P1O95397 391 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ZNF157P51786 506 aaPredicted RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 VWA3BQ502W6 1294 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 FAM83BQ5T0W9 1011 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 FYB2Q5VWT5 728 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 KRT40Q6A162 431 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 TRPM4Q8TD43 1214 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 CLIP3Q96DZ5 547 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 DSCC1Q9BVC3 393 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 NUP85Q9BW27 656 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 SPATA16Q9BXB7 569 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 FBXO28Q9NVF7 368 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 NDE1Q9NXR1 346 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 SEL1LQ9UBV2 794 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ADD3Q9UEY8 706 aaKnown RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 CNOT8Q9UFF9 292 aaKnown RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 EIF3FO00303 357 aaPredicted RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 TBCAO75347 108 aaKnown RBP8.91□□□□□ -0.98
LDB3-201ENST00000263066 MARK3P27448 753 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ECE1P42892 770 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ZNF844Q08AG5 666 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 SHC4Q6S5L8 630 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 UBE2Q1Q7Z7E8 422 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 C2orf69Q8N8R5 385 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 SMYD1Q8NB12 490 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 GIPC3Q8TF64 312 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 HSPBAP1Q96EW2 488 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 FAM161BQ96MY7 647 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 ZMYND12Q9H0C1 365 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 BHMT2Q9H2M3 363 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 TBC1D23Q9NUY8 699 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 PCDHA13Q9Y5I0 950 aa8.91□□□□□ -0.98
LDB3-201ENST00000263066 COL22A1Q8NFW1 1626 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms