RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SRPK1Q96SB4 655 aaKnown RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 MTIF3Q9H2K0 278 aaKnown RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 MYOZ2Q9NPC6 264 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PPP6R2O75170 966 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PRAMEP78395 509 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 CNGA3Q16281 694 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 THNSL1Q8IYQ7 743 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PLEKHF1Q96S99 279 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PKD2L2Q9NZM6 624 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 C6orf203Q9P0P8 240 aaPredicted RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 RWDD2AQ9UIY3 292 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 NMT2O60551 498 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 MLH1P40692 756 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 AP1B1Q10567 949 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 ZNF589Q86UQ0 364 aaPredicted RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 SCN4BQ8IWT1 228 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 SNRNP27Q8WVK2 155 aaKnown RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 ADAM21Q9UKJ8 722 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 CPDO75976 1380 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 MYL1P05976 194 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 SOX11P35716 441 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 ATXN3P54252 364 aaPredicted RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PPP2R2AP63151 447 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 EPHA10Q5JZY3 1008 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PASD1Q8IV76 773 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 OSBP2Q969R2 916 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 TOGARAM2Q6ZUX3 1019 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 PPP2R3CQ969Q6 453 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 SMAD5Q99717 465 aaKnown RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 KLC4Q9NSK0 619 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
TTC39A-202ENST00000262676 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 KRT38O76015 456 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 TMEM39BQ9GZU3 492 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
TTC39A-202ENST00000262676 TMEM161AQ9NX61 479 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 ENO1P06733 434 aaKnown RBP13.61□□□□□ -0.23
TTC39A-202ENST00000262676 VEGFAP15692 232 aaPredicted RBP13.61□□□□□ -0.23
TTC39A-202ENST00000262676 KCNA2P16389 499 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 DCAF4L1Q3SXM0 396 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 FBXO40Q9UH90 709 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 PODXLO00592 558 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 NUP93Q8N1F7 819 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 TMEM206Q9H813 350 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 DYTNA2CJ06 578 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 CDC25AP30304 524 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 MTMR1Q13613 665 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 ATXN7L3BQ96GX2 97 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 CUEDC2Q9H467 287 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 TBC1D23Q9NUY8 699 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 MYO1GB0I1T2 1018 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 KIF1CO43896 1103 aaKnown RBP13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 PPP1R2P3Q6NXS1 205 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 URGCPQ8TCY9 931 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 FAM96AQ9H5X1 160 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 POLD4Q9HCU8 107 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 USE1Q9NZ43 259 aa13.61□□□□□ -0.23
TTC39A-202ENST00000262676 IKBKBO14920 756 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 SLC16A10Q8TF71 515 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 FAM81BQ96LP2 452 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 SH3GL1Q99961 368 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 RHBDL2Q9NX52 303 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 FEM1BQ9UK73 627 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 RPS6P62753 249 aaKnown RBP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 ZNF394Q53GI3 561 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 BZW1Q7L1Q6 419 aaKnown RBP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 RHPN2Q8IUC4 686 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 SFI1A8K8P3 1242 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 TSC22D2O75157 780 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 ZBED6P86452 979 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 TMEM154Q6P9G4 183 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 ANAPC7Q9UJX3 599 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 KRT87PA6NCN2 255 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 PGM1P36871 562 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 GUCY1A3Q02108 690 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 LUZP2Q86TE4 346 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms