RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ANAPC7Q9UJX3 599 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 CXCL11O14625 94 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 TBX3O15119 743 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 IL9RQ01113 521 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 EIF2B5Q13144 721 aaKnown RBP14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 SLMAPQ14BN4 828 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 TBCCQ15814 346 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 RESP18Q5W5W9 173 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 OOSP2Q86WS3 158 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 NHEJ1Q9H9Q4 299 aaPredicted RBP14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 CEP72Q9P209 647 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 KRT7P08729 469 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 ACADMP11310 421 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 HADHAP40939 763 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 ZBED6P86452 979 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 ANO4Q32M45 955 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 PPP4R4Q6NUP7 873 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 SPATA17Q96L03 361 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 AIFM3Q96NN9 605 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 HEY1Q9Y5J3 304 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 IQANK1A0A1B0GTG1 560 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 RSPH10B2B2RC85 870 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 CSF1RP07333 972 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 RSPH10BP0C881 870 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 MAP4P27816 1152 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 EPHB3P54753 998 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PREPLQ4J6C6 727 aaPredicted RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 IL31Q6EBC2 164 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 TEKT4Q8WW24 435 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 GLIS2Q9BZE0 524 aaPredicted RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PLS3P13797 630 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 NOP14P78316 857 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 TMED2Q15363 201 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 STAG2Q8N3U4 1231 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 MRPS31Q92665 395 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PRDM10Q9NQV6 1147 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 GPR75-ASB3A0A0A6YYF3 556 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 CARNS1A5YM72 827 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 ZNF197O14709 1029 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 EIF4A3P38919 411 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 NECTIN1Q15223 517 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 AGBL1Q96MI9 1066 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 DHX35Q9H5Z1 703 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PCDHA13Q9Y5I0 950 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 ATP6V1E1P36543 226 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 GPC5P78333 572 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 TRIM48Q8IWZ4 208 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PDIK1LQ8N165 341 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 SAMD3Q8N6K7 520 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 FBXL13Q8NEE6 735 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 RABEP2Q9H5N1 569 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 DIP2BQ9P265 1576 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 FAM95CA0A1B0GW59 222 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PSMD3O43242 534 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 PRAMEP78395 509 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 ITIH5Q86UX2 942 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 RASSF3Q86WH2 238 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 UHMK1Q8TAS1 419 aaKnown RBP14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 SCFD1Q8WVM8 642 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 C11orf70Q9BRQ4 267 aa14.42□□□□□ -0.1
PDGFRB-201ENST00000261799 SRGNP10124 158 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ACADSBP45954 432 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 KPNA1P52294 538 aaPredicted RBP14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ZNF445P59923 1031 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 BBS9Q3SYG4 887 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 SLC25A13Q9UJS0 675 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 PRG3Q9Y2Y8 225 aaPredicted RBP14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 CFAP69A5D8W1 941 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ANKRD40Q6AI12 368 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ATG9AQ7Z3C6 839 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 TMEM199Q8N511 208 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 NRXN1Q9ULB1 1477 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 TTLL13PA6NNM8 815 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 TOM1L1O75674 476 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 RALBP11234 206 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ATXN3P54252 364 aaPredicted RBP14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 CXCL9Q07325 125 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 LAMB3Q13751 1172 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ZC3H15Q8WU90 426 aaKnown RBP14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 ZDHHC15Q96MV8 337 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 AKR1A1P14550 325 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 C10orf120Q5SQS8 335 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 LZICQ8WZA0 190 aa14.41□□□□□ -0.1
PDGFRB-201ENST00000261799 POLRMTO00411 1230 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 APOL1O14791 398 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 TAF6P49848 677 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 TRIP13Q15645 432 aaPredicted RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 RABL6Q3YEC7 729 aaPredicted RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 TRMT2AQ8IZ69 625 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 PDS5AQ29RF7 1337 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 ZW10O43264 779 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 MSCO60682 206 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 ENOX1Q8TC92 643 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 PYROXD1Q8WU10 500 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 PPP1R12CQ9BZL4 782 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 E9PCH4 1651 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms