RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 UNC45AQ9H3U1 944 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 KLHL8Q9P2G9 620 aaPredicted RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 A0A1W2PQC6 194 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 GLTPD2A6NH11 291 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 H3BRB1 525 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 RNF40O75150 1001 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 ASPHQ12797 758 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 RAPH1Q70E73 1250 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 TUT1Q9H6E5 874 aaKnown RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 ATP11BQ9Y2G3 1177 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 ENC1O14682 589 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 CIB2O75838 187 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 MAPRE1Q15691 268 aaKnown RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 LMBRD2Q68DH5 695 aaPredicted RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 CATSPER3Q86XQ3 398 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 STKLD1Q8NE28 680 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 SPON2Q9BUD6 331 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 KLC2Q9H0B6 622 aa14.84□□□□□ -0.03
CDH1-201ENST00000261769 FNDC3AQ9Y2H6 1198 aaKnown RBP14.84□□□□□ -0.03
CDH1-201ENST00000261769 SOWAHDA6NJG2 315 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 EXTL3O43909 919 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 ADORA2AP29274 412 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 CEP85LQ5SZL2 805 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 TTC30AQ86WT1 665 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 DHX38Q92620 1227 aaKnown RBP14.83□□□□□ -0.03
CDH1-201ENST00000261769 PPP1R13BQ96KQ4 1090 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 NUDCD1Q96RS6 583 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 TARS2Q9BW92 718 aaKnown RBP14.83□□□□□ -0.03
CDH1-201ENST00000261769 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.03
CDH1-201ENST00000261769 H3BRJ5 948 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 NPTXRO95502 500 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 RAG1P15918 1043 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 APBA1Q02410 837 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 ANKRD40Q6AI12 368 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 SYT2Q8N9I0 419 aaPredicted RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 TLK1Q9UKI8 766 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 MOCS2O96007 188 aaPredicted RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 SOX5P35711 763 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 MORC4Q8TE76 937 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 CFAP57Q96MR6 1250 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 MED15Q96RN5 788 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 XPNPEP3Q9NQH7 507 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 NR2E3Q9Y5X4 410 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 AK9Q5TCS8 1911 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 POLR1AO95602 1720 aaPredicted RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 KLRC1P26715 233 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 LLGL1Q15334 1064 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 PTPN21Q16825 1174 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 SHCBP1Q8NEM2 672 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 VPS39Q96JC1 886 aa14.83□□□□□ -0.04
CDH1-201ENST00000261769 ZNF512Q96ME7 567 aaPredicted RBP14.83□□□□□ -0.04
CDH1-201ENST00000261769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.83□□□□□ -0.04
CDH1-201ENST00000261769 NDUFAB1O14561 156 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 NAMPTP43490 491 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 TAF6P49848 677 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 ADSSL1Q8N142 457 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 MAGEB5Q9BZ81 275 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 RNF208Q9H0X6 261 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 PPFIA4O75335 1185 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 PAMP19021 973 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 TAF2Q6P1X5 1199 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 B4GALNT4Q76KP1 1039 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 VSIG1Q86XK7 387 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 ANKRD42Q8N9B4 389 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 C18orf8Q96DM3 657 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 RILPQ96NA2 401 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 NT5C1AQ9BXI3 368 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 PRG3Q9Y2Y8 225 aaPredicted RBP14.82□□□□□ -0.04
CDH1-201ENST00000261769 CCDC188H7C350 402 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 TBC1D12O60347 775 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 CYP2C8P10632 490 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 ZFXP17010 805 aaPredicted RBP14.82□□□□□ -0.04
CDH1-201ENST00000261769 ALDH1A3P47895 512 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 IQSEC1Q6DN90 963 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
CDH1-201ENST00000261769 EPAS1Q99814 870 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 DYRK4Q9NR20 520 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 PARVAQ9NVD7 372 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 CREB3O43889 395 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 FTLP02792 175 aaPredicted RBP14.82□□□□□ -0.04
CDH1-201ENST00000261769 TPD52P55327 224 aaPredicted RBP14.82□□□□□ -0.04
CDH1-201ENST00000261769 SP3Q02447 781 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 ATP6V1E2Q96A05 226 aa14.82□□□□□ -0.04
CDH1-201ENST00000261769 P4HA2O15460 535 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 ARP10275 920 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 HSD17B4P51659 736 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 KRT33BQ14525 404 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 IQCB1Q15051 598 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 ZNF564Q8TBZ8 553 aaPredicted RBP14.81□□□□□ -0.04
CDH1-201ENST00000261769 ZBTB9Q96C00 473 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 IFT43Q96FT9 208 aa14.81□□□□□ -0.04
CDH1-201ENST00000261769 DDX23Q9BUQ8 820 aaKnown RBP14.81□□□□□ -0.04
CDH1-201ENST00000261769 ABHD10Q9NUJ1 306 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms