RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ENTPD3O75355 529 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 PYGMP11217 842 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 FKBP1AP62942 108 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 C2CD6Q53TS8 623 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 EMC10Q5UCC4 262 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 CYB5D1Q6P9G0 228 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 MOXD1Q6UVY6 613 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 PRELID2Q8N945 189 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 GIMAP7Q8NHV1 300 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 TATDN2Q93075 761 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 BORCS6Q96GS4 357 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 NCAPGQ9BPX3 1015 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 KIAA0391O15091 583 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 CHUKO15111 745 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 POLR2MP0CAP2 368 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 GJC1P36383 396 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 NPEPPSP55786 919 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 POU5F1Q01860 360 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 PPP3CAQ08209 521 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 SPP2Q13103 211 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 GRM1Q13255 1194 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 LONRF1Q17RB8 773 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 YTHDF3Q7Z739 585 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 TBC1D1Q86TI0 1168 aaPredicted RBP15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 ANKS4BQ8N8V4 417 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 CRYGNQ8WXF5 182 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 FAM118BQ9BPY3 351 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 SAMD15Q9P1V8 674 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 MAST2Q6P0Q8 1798 aa15.56■□□□□ 0.08
SFSWAP-201ENST00000261674 GTPBP10A4D1E9 387 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 PPFIA2O75334 1257 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 RPSAP08865 295 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 DRD4P21917 467 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 STAT2P52630 851 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 EIF3BP55884 814 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 BMT2Q1RMZ1 405 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 TTC27Q6P3X3 843 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 EIF1ADQ8N9N8 165 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 C1orf131Q8NDD1 294 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 MYCBPQ99417 103 aaPredicted RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 GPR88Q9GZN0 384 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 ASIC3Q9UHC3 531 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 TBK1Q9UHD2 729 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 RASGRF2O14827 1237 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 GPC5P78333 572 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 BYSLQ13895 437 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 ZKSCAN8Q15776 578 aaPredicted RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 SNCBQ16143 134 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 PARP9Q8IXQ6 854 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 FUKQ8N0W3 1084 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 MKL1Q969V6 931 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 DLATP10515 647 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 SSR1P43307 286 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 ZFYVE27Q5T4F4 411 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 PADI6Q6TGC4 694 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 ZDHHC14Q8IZN3 488 aa15.55■□□□□ 0.08
SFSWAP-201ENST00000261674 VAMP7P51809 220 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 CALCOCO2Q13137 446 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 CEP55Q53EZ4 464 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 SLC47A2Q86VL8 602 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 ZNF653Q96CK0 615 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 SAAL1Q96ER3 474 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 MRIQ9BWK5 157 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 GPRC5CQ9NQ84 441 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 ZDHHC18Q9NUE0 388 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 ZHX2Q9Y6X8 837 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 IGLV3-22A0A075B6J6 115 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 IPO5O00410 1097 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 CLDN3O15551 220 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 CREB1P16220 341 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 ERMARDQ5T6L9 678 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 ZDHHC24Q6UX98 284 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 SULF1Q8IWU6 871 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 RHOT2Q8IXI1 618 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 GDAP1Q8TB36 358 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 TEPSINQ96N21 525 aa15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 DDX23Q9BUQ8 820 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 CNOT10Q9H9A5 744 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 ACTR5Q9H9F9 607 aaPredicted RBP15.54■□□□□ 0.08
SFSWAP-201ENST00000261674 EIF3DO15371 548 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■□□□□ 9.5
SFSWAP-201ENST00000261674 KRT5P13647 590 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 VCAM1P19320 739 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 SWT1Q5T5J6 900 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 ATG4AQ8WYN0 398 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 PCDHB18PQ96TA0 734 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 NUP85Q9BW27 656 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 MTUS1Q9ULD2 1270 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 NENFQ9UMX5 172 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 PHF2O75151 1096 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 PSMD10O75832 226 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 ANXA13P27216 316 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 SSTR3P32745 418 aaPredicted RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 CIITAP33076 1130 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 MTMR2Q13614 643 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms