RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 KCTD13Q8WZ19 329 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 ANAPC16Q96DE5 110 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 TIGD1Q96MW7 591 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 ZFYVE21Q9BQ24 234 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 NOL10Q9BSC4 688 aaKnown RBP4.34□□□□□ -1.71
CDRT1-201ENST00000261644 NAT10Q9H0A0 1025 aaKnown RBP4.34□□□□□ -1.71
CDRT1-201ENST00000261644 ECHDC1Q9NTX5 307 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 ANO10Q9NW15 660 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 TMEM51Q9NW97 253 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 LRP2BPQ9P2M1 347 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 RIPOR2Q9Y4F9 1068 aa4.34□□□□□ -1.71
CDRT1-201ENST00000261644 MED1Q15648 1581 aaPredicted RBP4.34□□□□□ -1.71
CDRT1-201ENST00000261644 MRC1P22897 1456 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 NCAPD2Q15021 1401 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ANKARQ7Z5J8 1434 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 MED23Q9ULK4 1368 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PHLPP2Q6ZVD8 1323 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 GOLGA6L9A6NEM1 432 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 IKBKBO14920 756 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 TPD52L2O43399 206 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 RAD17O75943 681 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 SLU7O95391 586 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ENO2P09104 434 aaPredicted RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 COMTP21964 271 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PTGS1P23219 599 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 RPS6KB1P23443 525 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ABHD18Q0P651 414 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 RASGRF1Q13972 1273 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 USP10Q14694 798 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PTPN14Q15678 1187 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 FXNQ16595 210 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 DDR2Q16832 855 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 SKIDA1Q1XH10 827 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PAN2Q504Q3 1202 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 HSP90AB2PQ58FF8 381 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 RNF187Q5TA31 235 aaPredicted RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 JAKMIP3Q5VZ66 844 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ADALQ6DHV7 355 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 MRM1Q6IN84 353 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 G2E3Q7L622 706 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PPP1R42Q7Z4L9 355 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 EXOC8Q8IYI6 725 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 CLASRPQ8N2M8 674 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 CCDC150Q8NCX0 1101 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PIP4K2CQ8TBX8 421 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 HNRNPLLQ8WVV9 542 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 CLEC4DQ8WXI8 215 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 NEIL1Q96FI4 390 aaPredicted RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ZNF274Q96GC6 653 aaPredicted RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 GPATCH3Q96I76 525 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 CHAMP1Q96JM3 812 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ZNF830Q96NB3 372 aaPredicted RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 UTP14AQ9BVJ6 771 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 TRIM55Q9BYV6 548 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 TNMDQ9H2S6 317 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ZSWIM4Q9H7M6 989 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 STK26Q9P289 416 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 RBPJLQ9UBG7 517 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 TSPYL4Q9UJ04 414 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ZFP69BQ9UJL9 534 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ING1Q9UK53 422 aaPredicted RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 TPCN1Q9ULQ1 816 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 ZFR2Q9UPR6 939 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 EXOC6BQ9Y2D4 811 aa4.33□□□□□ -1.72
CDRT1-201ENST00000261644 LRRFIP2Q9Y608 721 aaKnown RBP4.33□□□□□ -1.72
CDRT1-201ENST00000261644 PHRF1Q9P1Y6 1649 aaKnown RBP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 SLIT1O75093 1534 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 ADCY9O60503 1353 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 MAP3K19Q56UN5 1328 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 MAP3K15Q6ZN16 1313 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 WDR19Q8NEZ3 1342 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 LOC102724159A0A0B4J2E5 919 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 ZNF839A8K0R7 811 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 EFCAB8A8MWE9 144 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 ENPP3O14638 875 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 SMAD7O15105 426 aaKnown RBP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 PFKFB2O60825 505 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 SURF6O75683 361 aaKnown RBP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 FBXO21O94952 628 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 U2AF2P26368 475 aaKnown RBP eCLIP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 CCZ1BP86790 482 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 CCZ1P86791 482 aaPredicted RBP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 DPTQ07507 201 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 RESTQ13127 1097 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 FHL2Q14192 279 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 DCTN1Q14203 1278 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 PWP2Q15269 919 aaKnown RBP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 STX1AQ16623 288 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 SMN1Q16637 294 aaKnown RBP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 KRT24Q2M2I5 525 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 ANO6Q4KMQ2 910 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 CD276Q5ZPR3 534 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 CREB3L3Q68CJ9 461 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 CTR9Q6PD62 1173 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 EEPD1Q7L9B9 569 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 POLNQ7Z5Q5 900 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 FILIP1Q7Z7B0 1213 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.32□□□□□ -1.72
CDRT1-201ENST00000261644 JMYQ8N9B5 988 aa4.32□□□□□ -1.72
CDRT1-201ENST00000261644 ST13P5Q8NFI4 369 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms