RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 CNBD2Q96M20 576 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 MAP3K7CLP57077 242 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 BASP1P80723 227 aaKnown RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 OVGP1Q12889 678 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SATL1Q86VE3 508 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 CCDC127Q96BQ5 260 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 DDX56Q9NY93 547 aaKnown RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SPOPO43791 374 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 IQCF2Q8IXL9 164 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 MAML3Q96JK9 1138 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 REREQ9P2R6 1566 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SPDYE16A6NNV3 312 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 TAF12Q16514 161 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 ZC2HC1CQ53FD0 456 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 WASHC2DQ5SRD0 308 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 BARGINQ6ZT62 677 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 CD302Q8IX05 232 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 PBKQ96KB5 322 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 SLC26A4O43511 780 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 ENO1P06733 434 aaKnown RBP13.77□□□□□ -0.2
TMEM260-201ENST00000261556 CAPN1P07384 714 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 OXCT1P55809 520 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 PTGDRQ13258 359 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 TRPC3Q13507 836 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 NEK8Q86SG6 692 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 DCPSQ96C86 337 aaKnown RBP13.77□□□□□ -0.2
TMEM260-201ENST00000261556 MTBPQ96DY7 904 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 CEP44Q9C0F1 390 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 GDF3Q9NR23 364 aa13.77□□□□□ -0.2
TMEM260-201ENST00000261556 LRRC10BA6NIK2 292 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 NOP9Q86U38 636 aaKnown RBP13.77□□□□□ -0.21
TMEM260-201ENST00000261556 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 TUBGCP5Q96RT8 1024 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
TMEM260-201ENST00000261556 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 NDUFA13Q9P0J0 144 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 SLC12A6Q9UHW9 1150 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 HBS1LQ9Y450 684 aaKnown RBP13.77□□□□□ -0.21
TMEM260-201ENST00000261556 ZBBXA8MT70 800 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 B2RBV5 119 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 H3BRJ5 948 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 CCDC188H7C350 402 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 FLT3P36888 993 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 HALP42357 657 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 MRPS15P82914 257 aaKnown RBP13.77□□□□□ -0.21
TMEM260-201ENST00000261556 HPCAP84074 193 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 CYP4A11Q02928 519 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 CNGA3Q16281 694 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
TMEM260-201ENST00000261556 A0A0G2JLW4 131 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 SORBS3O60504 671 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 GDF11O95390 407 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ADCY8P40145 1251 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 HP1BP3Q5SSJ5 553 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF658Q5TYW1 1059 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 DQX1Q8TE96 717 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 OMA1Q96E52 524 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 TLR10Q9BXR5 811 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 HACD3Q9P035 362 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 CTNNAL1Q9UBT7 734 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 MRPL11Q9Y3B7 192 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZC3H4Q9UPT8 1303 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZWINTO95229 277 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ASLP04424 464 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 FAM163BP0C2L3 166 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 EEF1DP29692 281 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 STK4Q13043 487 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 SPARCL1Q14515 664 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 KHDC1Q4VXA5 237 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 MTMR8Q96EF0 704 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF510Q9Y2H8 683 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 TMED5Q9Y3A6 229 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 HTR3EA5X5Y0 456 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 H2AFZP0C0S5 128 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 BNIP1Q12981 228 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms