RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HID1Q8IV36 788 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC12Q8WUD4 166 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 NAT14Q8WUY8 206 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RMDN1Q96DB5 314 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 SEC16BQ96JE7 1060 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 DNAJC1Q96KC8 554 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 OLFM3Q96PB7 478 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CTRCQ99895 268 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RIOK1Q9BRS2 568 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 NTPCRQ9BSD7 190 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RAD21L1Q9H4I0 556 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 KCNQ5Q9NR82 932 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ENAMQ9NRM1 1142 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 SLC39A1Q9NY26 324 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ADAM22Q9P0K1 906 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 SENP1Q9P0U3 644 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CDC23Q9UJX2 597 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 FBXO2Q9UK22 296 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 MRPL42Q9Y6G3 142 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ZNF521Q96K83 1311 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CAPN8A6NHC0 703 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 GNAI2P04899 355 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CHGBP05060 677 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 LIFRP42702 1097 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ALDH5A1P51649 535 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CENPCQ03188 943 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RASGRF1Q13972 1273 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PHKG1Q16816 387 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PTPN21Q16825 1174 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 KCTD21Q4G0X4 260 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 TOGARAM2Q6ZUX3 1019 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ZER1Q7Z7L7 766 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ZBED8Q8IZ13 594 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 C12orf50Q8NA57 414 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RAPGEF5Q92565 580 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ATP6V1E2Q96A05 226 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 HDAC11Q96DB2 347 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 TCEANC2Q96MN5 208 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 BRD9Q9H8M2 597 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 GPHNQ9NQX3 736 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 FAM114A2Q9NRY5 505 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CHIC2Q9UKJ5 165 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ADAMTS8Q9UP79 889 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 SLC12A4Q9UP95 1085 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PI4K2BG5E9Z4 385 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 H7C0C1 242 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 IRS4O14654 1257 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 STX6O43752 255 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 KLHL2O95198 593 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CRABP2P29373 138 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ATP5OP48047 213 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 KRT6CP48668 564 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 LIMK1P53667 647 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RPP38P78345 283 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 LACTBP83111 547 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 TUBB2AQ13885 445 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 MAJINQ3KP22 176 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RILPL1Q5EBL4 403 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 BORAQ6PGQ7 559 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 STK32CQ86UX6 486 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC33Q8N5R6 958 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 NAT8LQ8N9F0 302 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 ANGPTL6Q8NI99 470 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PI4K2BQ8TCG2 481 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 GTF3C2Q8WUA4 911 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RUFY2Q8WXA3 655 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 DACT3Q96B18 629 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RRP36Q96EU6 259 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 IFT74Q96LB3 600 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 TUBB2BQ9BVA1 445 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 TEX13BQ9BXU2 312 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 STK33Q9BYT3 514 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 AGXT2Q9BYV1 514 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PITHD1Q9GZP4 211 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC113Q9H0I3 377 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 WNT5BQ9H1J7 359 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 VPS11Q9H270 941 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 SP140LQ9H930 580 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PTTG2Q9NZH5 202 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 GRID1Q9ULK0 1009 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 DOLKQ9UPQ8 538 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 DUOX2Q9NRD8 1548 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 FUOMA2VDF0 154 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 POM121CA8CG34 1229 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PFDN6O15212 129 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PRPF3O43395 683 aaKnown RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 TCEA3O75764 348 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ZMYND10O75800 440 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 HPGDP15428 266 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CDC27P30260 824 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ME1P48163 572 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CAMK4Q16566 473 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 SLFN13Q68D06 897 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 MRPL10Q7Z7H8 261 aaKnown RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 NUP93Q8N1F7 819 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 SEPT1Q8WYJ6 367 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 HSPH1Q92598 858 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 NCLNQ969V3 563 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms