RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 KIRREL3Q8IZU9 778 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 VPS39Q96JC1 886 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 ZFP91Q96JP5 570 aaPredicted RBP14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 AGBL1Q96MI9 1066 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 LZTFL1Q9NQ48 299 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 NFAT5O94916 1531 aa14.33□□□□□ -0.12
PRPF38A-201ENST00000257181 UMODL1Q5DID0 1318 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 PSMA2P25787 234 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 PTGISQ16647 500 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 LMO7Q8WWI1 1683 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 NFASCO94856 1347 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 M0QYV0 167 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 RAB30Q15771 203 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 EDRF1Q3B7T1 1238 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 ASAP3Q8TDY4 903 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 IGDCC4Q8TDY8 1250 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 NDST4Q9H3R1 872 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 CATSPERBQ9H7T0 1116 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 LRRC4BQ9NT99 713 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 FOXP2O15409 715 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 SLC11A2P49281 568 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 P2RX7Q99572 595 aaKnown RBP14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 IRAK4Q9NWZ3 460 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 BRPF3Q9ULD4 1205 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 NMT2O60551 498 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 CD58P19256 250 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 RFC2P35250 354 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 SMARCB1Q12824 385 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 PEX6Q13608 980 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 CCNYQ8ND76 341 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 RANBP17Q9H2T7 1088 aaKnown RBP14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 CHST12Q9NRB3 414 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 RRN3Q9NYV6 651 aa14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
PRPF38A-201ENST00000257181 H3BRB1 525 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 SNAP23O00161 211 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 MTSS1O43312 755 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 MXRA7P84157 204 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 TATDN1Q6P1N9 297 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 SCG3Q8WXD2 468 aaKnown RBP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 TRIM45Q9H8W5 580 aaPredicted RBP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 PPP1R12AO14974 1030 aaPredicted RBP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 OSCP1Q8WVF1 389 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 DCLK3Q9C098 648 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 TMEM260Q9NX78 707 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 SYNJ2BP-COX16A0A087WUM0 186 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 POTECB2RU33 542 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 GOLGA8MH3BSY2 632 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 ZC3H11AO75152 810 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 CAND2O75155 1236 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 CCDC144BQ3MJ40 725 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 PSRC1Q6PGN9 363 aaPredicted RBP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 MPZL3Q6UWV2 235 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 CSGALNACT1Q8TDX6 532 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 C7orf25Q9BPX7 421 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 TRPM5Q9NZQ8 1165 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 COX16Q9P0S2 106 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 MAN1B1Q9UKM7 699 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 ZNF148Q9UQR1 794 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 MX2P20592 715 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 GTF2F1P35269 517 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 APBA1Q02410 837 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 RABGAP1LQ5R372 815 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 LMBRD2Q68DH5 695 aaPredicted RBP14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 KLC3Q6P597 504 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 GPR142Q7Z601 462 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 ZNF558Q96NG5 402 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 KLC2Q9H0B6 622 aa14.31□□□□□ -0.12
PRPF38A-201ENST00000257181 ADCY8P40145 1251 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 TUFMP49411 452 aaKnown RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 GRIK4Q16099 956 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 TTC30AQ86WT1 665 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 FIBCD1Q8N539 461 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 GDAP1Q8TB36 358 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 PDCD2LQ9BRP1 358 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 CARD6Q9BX69 1037 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 ADAM22Q9P0K1 906 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 PCDHA5Q9Y5H7 936 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 FARP2O94887 1054 aaPredicted RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 THP07101 528 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 PFKMP08237 780 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 IFNAR2P48551 515 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 KRT35Q92764 455 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 CYP3A43Q9HB55 503 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 GOLGA8SH3BPF8 625 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 PABPC1LQ4VXU2 614 aaKnown RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 RWDD4Q6NW29 188 aaKnown RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 NFRKBQ6P4R8 1299 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 PGBD3Q8N328 593 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 MICALL1Q8N3F8 863 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms