RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 TLR3O15455 904 aaKnown RBP13.2□□□□□ -0.3
NIP7-201ENST00000254940 CLTBP09497 229 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 PHKA2P46019 1235 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 PTENP60484 403 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
NIP7-201ENST00000254940 TFDP1Q14186 410 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 SYCP1Q15431 976 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 RSPH3Q86UC2 560 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
NIP7-201ENST00000254940 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 HES2Q9Y543 173 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 LAMA3Q16787 3333 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 LGALS16A8MUM7 142 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 LPIN1Q14693 890 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 PPP2R5AQ15172 486 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 SLC39A4Q6P5W5 647 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 LRRC8DQ7L1W4 858 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 TMCO2Q7Z6W1 182 aaPredicted RBP13.2□□□□□ -0.3
NIP7-201ENST00000254940 FAM228AQ86W67 206 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 CEP120Q8N960 986 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 RNF169Q8NCN4 708 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 CBWD1Q9BRT8 395 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 TCHPQ9BT92 498 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
NIP7-201ENST00000254940 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
NIP7-201ENST00000254940 PIN4Q9Y237 131 aaKnown RBP13.2□□□□□ -0.3
NIP7-201ENST00000254940 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 NBNO60934 754 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 EEF1GP26641 437 aaKnown RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 KRT9P35527 623 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 MGAT3Q09327 533 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 STRN3Q13033 797 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 GPNMBQ14956 572 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 EPM2AIP1Q7L775 607 aaPredicted RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 ANKRD33Q7Z3H0 272 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 LZTFL1Q9NQ48 299 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 ABHD10Q9NUJ1 306 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 ST3GAL5Q9UNP4 418 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 TGFB1I1O43294 461 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 LRRN2O75325 713 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 ERLIN2O94905 339 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 CSF2RAP15509 400 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 ARF4P18085 180 aaPredicted RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 SPAG1Q07617 926 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 MAPK6Q16659 721 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 EIF2AQ9BY44 585 aaKnown RBP13.19□□□□□ -0.3
NIP7-201ENST00000254940 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
NIP7-201ENST00000254940 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
NIP7-201ENST00000254940 MGEA5O60502 916 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 TSPAN1O60635 241 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 PPP1R37O75864 691 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 RAG1P15918 1043 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 LIG4P49917 911 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 FBXO47Q5MNV8 452 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 TMEM192Q8IY95 271 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 TIPINQ9BVW5 301 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.18□□□□□ -0.3
NIP7-201ENST00000254940 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 V9GYY5 206 aaPredicted RBP13.18□□□□□ -0.3
NIP7-201ENST00000254940 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
NIP7-201ENST00000254940 EVI5O60447 810 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 STX10O60499 249 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 SELPP16109 830 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 ACOT2P49753 483 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 CRYBB1P53674 252 aaPredicted RBP13.18□□□□□ -0.3
NIP7-201ENST00000254940 GTF2BQ00403 316 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 AMHR2Q16671 573 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 CDCA2Q69YH5 1023 aaPredicted RBP13.18□□□□□ -0.3
NIP7-201ENST00000254940 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 LRRN4CLQ8ND94 238 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.3
NIP7-201ENST00000254940 TBX21Q9UL17 535 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
NIP7-201ENST00000254940 MEIS3P2A8K0S8 358 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms