RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 RFX1P22670 979 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 CNGA1P29973 690 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 CCND3P30281 292 aaPredicted RBP12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 SMTNP53814 917 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 FAM193AP78312 1265 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 GTF2BQ00403 316 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 DMTNQ08495 405 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 FAM102BQ5T8I3 360 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 HAUS6Q7Z4H7 955 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 CCDC60Q8IWA6 550 aaPredicted RBP12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 PCYT2Q99447 389 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 TLR10Q9BXR5 811 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 INTS2Q9H0H0 1204 aaKnown RBP12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 GABBR1Q9UBS5 961 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
CLUHP3-201ENST00000254109 TMEM150BA6NC51 233 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 DYNC1LI2O43237 492 aaPredicted RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 PSAPP07602 524 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 H2AFZP0C0S5 128 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 HSPA8P11142 646 aaKnown RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 CXCR5P32302 372 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 TCF7P36402 384 aaPredicted RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 VAMP7P51809 220 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 PEX3P56589 373 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 H2AFVQ71UI9 128 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 AFG1LQ8WV93 481 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 LMBR1Q8WVP7 490 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 SEPT1Q8WYJ6 367 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 RUBCNQ92622 972 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 TAF4BQ92750 862 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 PSMB7Q99436 277 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 PCIF1Q9H4Z3 704 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 APEX2Q9UBZ4 518 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 AJAP1Q9UKB5 411 aaPredicted RBP12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 INTUQ9ULD6 942 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 MYH11P35749 1972 aa12.35□□□□□ -0.43
CLUHP3-201ENST00000254109 CCDC169A6NNP5 214 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 F8VZ95 297 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 MAPK13O15264 365 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 P4HA2O15460 535 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 ZNF862O60290 1169 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 HMGCRP04035 888 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 HSPA1AP0DMV8 641 aaKnown RBP12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 HSPA1BP0DMV9 641 aaKnown RBP12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 LBX1P52954 281 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 LAMC2Q13753 1193 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 TERF2Q15554 542 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 TLK2Q86UE8 772 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 TRIM50Q86XT4 487 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 SH3TC2Q8TF17 1288 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 SH2D3AQ9BRG2 576 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 SLC16A4O15374 487 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 EVI5O60447 810 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 FTCDO95954 541 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 AKR1A1P14550 325 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 ATP4AP20648 1035 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 GRK4P32298 578 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 CASP8Q14790 479 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 KIFAP3Q92845 792 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 CEP170P1Q96L14 293 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 C17orf75Q9HAS0 396 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 ZNF302Q9NR11 478 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 HSPBP1Q9NZL4 362 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 PTPN22Q9Y2R2 807 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 EMSYQ7Z589 1322 aa12.34□□□□□ -0.43
CLUHP3-201ENST00000254109 IGKV6D-21A0A0A0MT36 114 aa12.33□□□□□ -0.44
CLUHP3-201ENST00000254109 A0A0A6YYK5 440 aaPredicted RBP12.33□□□□□ -0.44
CLUHP3-201ENST00000254109 GRID2IPA4D2P6 1211 aa12.33□□□□□ -0.44
CLUHP3-201ENST00000254109 POLR3GO15318 223 aaPredicted RBP12.33□□□□□ -0.44
CLUHP3-201ENST00000254109 INHAP05111 366 aa12.33□□□□□ -0.44
CLUHP3-201ENST00000254109 MATR3P43243 847 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms