RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 BASP1P80723 227 aaKnown RBP15.99■□□□□ 0.15
UBE4B-201ENST00000253251 DCAF4L1Q3SXM0 396 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 TRAPPC11Q7Z392 1133 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.99■□□□□ 0.15
UBE4B-201ENST00000253251 PDE11AQ9HCR9 933 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 INTUQ9ULD6 942 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 ATP8A1Q9Y2Q0 1164 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 STRNO43815 780 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 CYP3A4P08684 503 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 CLTAP09496 248 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 GARTP22102 1010 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 GKAP1Q5VSY0 366 aaPredicted RBP15.99■□□□□ 0.15
UBE4B-201ENST00000253251 PPFIBP2Q8ND30 876 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 AGPAT3Q9NRZ7 376 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 BCAP29Q9UHQ4 241 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 MID2Q9UJV3 735 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 MAP7Q14244 749 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 MUM1L1Q5H9M0 696 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
UBE4B-201ENST00000253251 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 KBTBD13C9JR72 458 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 CYP2C9P11712 490 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 ADCY2Q08462 1091 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 SPATC1LQ9H0A9 340 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 OLFML3Q9NRN5 406 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 KPNA6O60684 536 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 PSMC4P43686 418 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 ATP11AP98196 1134 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 PDE1BQ01064 536 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 DNAAF3Q8N9W5 541 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 DHX38Q92620 1227 aaKnown RBP15.98■□□□□ 0.15
UBE4B-201ENST00000253251 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.98■□□□□ 0.157e-6■■■■■ 27.5
UBE4B-201ENST00000253251 ZWILCHQ9H900 591 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 FAM198AQ9UFP1 575 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 CYP2B6P20813 491 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 NAB2Q15742 525 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 C6orf118Q5T5N4 469 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 LRRC31Q6UY01 552 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 VWA5AO00534 786 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 ZC3H11AO75152 810 aaKnown RBP eCLIP15.98■□□□□ 0.15
UBE4B-201ENST00000253251 ARP10275 920 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 CCZ1BP86790 482 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 CCZ1P86791 482 aaPredicted RBP15.98■□□□□ 0.15
UBE4B-201ENST00000253251 WDR72Q3MJ13 1102 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 PASD1Q8IV76 773 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 TTC25Q96NG3 672 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 AP1M1Q9BXS5 423 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 AGAP1Q9UPQ3 857 aa15.98■□□□□ 0.15
UBE4B-201ENST00000253251 F8W8V4 182 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 SKIP12755 728 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 RANBP17Q9H2T7 1088 aaKnown RBP15.97■□□□□ 0.15
UBE4B-201ENST00000253251 GPBP1L1Q9HC44 474 aaPredicted RBP15.97■□□□□ 0.15
UBE4B-201ENST00000253251 CYP26A1O43174 497 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 PNPLA4P41247 253 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 ARL4CP56559 192 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 ST3GAL1Q11201 340 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 DHX34Q14147 1143 aaKnown RBP15.97■□□□□ 0.15
UBE4B-201ENST00000253251 ZC2HC1CQ53FD0 456 aaPredicted RBP15.97■□□□□ 0.15
UBE4B-201ENST00000253251 TC2NQ8N9U0 490 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 LRRC8CQ8TDW0 803 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 INTS9Q9NV88 658 aaKnown RBP15.97■□□□□ 0.15
UBE4B-201ENST00000253251 PHLPP1O60346 1717 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 NPEPPSP55786 919 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 GIT2Q14161 759 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 CENPPQ6IPU0 288 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 NOTUMQ6P988 496 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 METTL7BQ6UX53 244 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 SLC8A2Q9UPR5 921 aa15.97■□□□□ 0.15
UBE4B-201ENST00000253251 ZNF142P52746 1687 aaPredicted RBP15.97■□□□□ 0.15
UBE4B-201ENST00000253251 ACOT2P49753 483 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 KLHDC7AQ5VTJ3 777 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 HSPH1Q92598 858 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 MCUR1Q96AQ8 359 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 RUSC1Q9BVN2 902 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 GOLGA8QA0A0J9YX86 632 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 GOLGA8OA6NCC3 632 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 HMGB1P1B2RPK0 211 aaPredicted RBP15.96■□□□□ 0.15
UBE4B-201ENST00000253251 POC1B-GALNT4F8VUJ3 575 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 GOLGA8NF8WBI6 632 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 FXR1P51114 621 aaKnown RBP eCLIP15.96■□□□□ 0.15
UBE4B-201ENST00000253251 PHLDB2Q86SQ0 1253 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 TARSL2A2RTX5 802 aaKnown RBP15.96■□□□□ 0.15
UBE4B-201ENST00000253251 MANSC4A6NHS7 340 aaPredicted RBP15.96■□□□□ 0.15
UBE4B-201ENST00000253251 HLA-DRAP01903 254 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 HERVK_113P62684 666 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 CDO1Q16878 200 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 SYDE1Q6ZW31 735 aaPredicted RBP15.96■□□□□ 0.15
UBE4B-201ENST00000253251 MGARPQ8TDB4 240 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 TMC2Q8TDI7 906 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 SLC5A5Q92911 643 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 C18orf8Q96DM3 657 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 NIF3L1Q9GZT8 377 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 MYPNQ86TC9 1320 aa15.96■□□□□ 0.15
UBE4B-201ENST00000253251 RASGRF2O14827 1237 aa15.96■□□□□ 0.14
UBE4B-201ENST00000253251 EVI5O60447 810 aa15.96■□□□□ 0.14
UBE4B-201ENST00000253251 NR1H3Q13133 447 aa15.96■□□□□ 0.14
UBE4B-201ENST00000253251 PPP2R5CQ13362 524 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms