RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 TSPY1Q01534 308 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 PODXLO00592 558 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 MYBL1P10243 752 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 RARBP10826 455 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 SCP2P22307 547 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 RBP5P82980 135 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 BBS9Q3SYG4 887 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 KLHDC7AQ5VTJ3 777 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 DDX47Q9H0S4 455 aaKnown RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 DNAJC17Q9NVM6 304 aaKnown RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 SNX9Q9Y5X1 595 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 ADORA2BP29275 332 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 PGM5Q15124 567 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 FAM102AQ5T9C2 384 aaPredicted RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 CDR2LQ86X02 465 aaPredicted RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 TMEM132DQ14C87 1099 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 SGSM1Q2NKQ1 1148 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 SLC30A5Q8TAD4 765 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 IP6K2Q9UHH9 426 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 CPSF3Q9UKF6 684 aaKnown RBP18.18■□□□□ 0.5
ACTN4-201ENST00000252699 SYNPO2Q9UMS6 1093 aa18.18■□□□□ 0.5
ACTN4-201ENST00000252699 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 TYW5A2RUC4 315 aaKnown RBP18.17■□□□□ 0.5
ACTN4-201ENST00000252699 EXTL3O43909 919 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 CPP00450 1065 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 SAT1P21673 171 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 BCAS4Q8TDM0 211 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 SLCO1A2P46721 670 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 PTPRAP18433 802 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 ANKRD20A3Q5VUR7 823 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 SCFD1Q8WVM8 642 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.17■□□□□ 0.52e-10■■■■□ 25.5
ACTN4-201ENST00000252699 TRIM10Q9UDY6 481 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
ACTN4-201ENST00000252699 MRFAP1Q9Y605 127 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 A0A087X0B3 334 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 NPTX2P47972 431 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 NLRP11P59045 1033 aaKnown RBP18.17■□□□□ 0.5
ACTN4-201ENST00000252699 PDE1BQ01064 536 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 RHOT1Q8IXI2 618 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 C4orf19Q8IY42 314 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 C10orf67Q8IYJ2 551 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 PDIK1LQ8N165 341 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 LCMT1Q9UIC8 334 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 KCNH4Q9UQ05 1017 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 FAN1Q9Y2M0 1017 aa18.17■□□□□ 0.5
ACTN4-201ENST00000252699 LMO7Q8WWI1 1683 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 P4HA2O15460 535 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 CASP4P49662 377 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 PLEKHH3Q7Z736 793 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 RBBP8NLQ8NC74 664 aaPredicted RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 URGCPQ8TCY9 931 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 P2RX7Q99572 595 aaKnown RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 GAS2O43903 313 aaKnown RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 PSMC4P43686 418 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 IFNAR2P48551 515 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 AFAP1L2Q8N4X5 818 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 MORC4Q8TE76 937 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 WNT8AQ9H1J5 351 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 NCAPHQ15003 741 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 BZW1Q7L1Q6 419 aaKnown RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 VPS52Q8N1B4 723 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 TTC13Q8NBP0 860 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 PI4K2AQ9BTU6 479 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 EPC1Q9H2F5 836 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 INTS9Q9NV88 658 aaKnown RBP18.16■□□□□ 0.5
ACTN4-201ENST00000252699 PARVAQ9NVD7 372 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 SNX12Q9UMY4 172 aa18.16■□□□□ 0.5
ACTN4-201ENST00000252699 RRN3P2A6NIE6 340 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 KRT7P08729 469 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 SRGAP2BP0DMP2 458 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 TROVE2P10155 538 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■□□□ 12.5
ACTN4-201ENST00000252699 ZNF131P52739 623 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 TTC19Q6DKK2 380 aaPredicted RBP18.15■□□□□ 0.5
ACTN4-201ENST00000252699 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 DNERQ8NFT8 737 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 HEY1Q9Y5J3 304 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
ACTN4-201ENST00000252699 FGRP09769 529 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 GJB7Q6PEY0 223 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 ZNF720Q7Z2F6 126 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 GSDMBQ8TAX9 411 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 STAP1Q9ULZ2 295 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 ADCY1Q08828 1119 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 NAB2Q15742 525 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 RWDD4Q6NW29 188 aaKnown RBP18.15■□□□□ 0.5
ACTN4-201ENST00000252699 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 CBWD2Q8IUF1 395 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms