RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 LCA5LO95447 670 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 PRKCIP41743 596 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 PSEN2P49810 448 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 PPP3CAQ08209 521 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 SURF1Q15526 300 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 FSCN1Q16658 493 aaKnown RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 TXLNBQ8N3L3 684 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 LMO3Q8TAP4 145 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 FAM81BQ96LP2 452 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 CCDC42Q96M95 316 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 NLRP4Q96MN2 994 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 TMEM117Q9H0C3 514 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 IFT122Q9HBG6 1241 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 AKT3Q9Y243 479 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 TNFSF13BQ9Y275 285 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 FHOD1Q9Y613 1164 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 SCN10AQ9Y5Y9 1956 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 OGTO15294 1046 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 EDN1P05305 212 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 CCDC172P0C7W6 258 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 SMIM10L2AP0DMW4 78 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 SMIM10L2BP0DMW5 78 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 ACTN1P12814 892 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 AP3M2P53677 418 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 ADAM17P78536 824 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 PRKCZQ05513 592 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 PRPF4BQ13523 1007 aaKnown RBP15.4■□□□□ 0.06
SDF2-201ENST00000247020 HGSNATQ68CP4 663 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 NFRKBQ6P4R8 1299 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 MPZL3Q6UWV2 235 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 CRELD2Q6UXH1 353 aaPredicted RBP15.4■□□□□ 0.06
SDF2-201ENST00000247020 SRGAP1Q7Z6B7 1085 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 TRPV1Q8NER1 839 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 LMBR1Q8WVP7 490 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 DESI2Q9BSY9 194 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 HAPLN2Q9GZV7 340 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 PTPRHQ9HD43 1115 aa15.4■□□□□ 0.06
SDF2-201ENST00000247020 CNTNAP2Q9UHC6 1331 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 ANK1P16157 1881 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 INO80B-WBP1J3KQ70 363 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 ABLIM1O14639 778 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
SDF2-201ENST00000247020 GNAT1P11488 350 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 HOXC8P31273 242 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 MATR3P43243 847 aaKnown RBP eCLIP15.39■□□□□ 0.05
SDF2-201ENST00000247020 GCLMP48507 274 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 GPC3P51654 580 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 NLRP11P59045 1033 aaKnown RBP15.39■□□□□ 0.05
SDF2-201ENST00000247020 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 ASIC2Q16515 512 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 KYAT1Q16773 422 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 ATF7IP2Q5U623 682 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 IQCEQ6IPM2 695 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 BRSK2Q8IWQ3 736 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 ZBTB45Q96K62 511 aaPredicted RBP15.39■□□□□ 0.05
SDF2-201ENST00000247020 FNBP1Q96RU3 617 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 INO80BQ9C086 356 aaPredicted RBP15.39■□□□□ 0.05
SDF2-201ENST00000247020 DEF6Q9H4E7 631 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 RBAKQ9NYW8 714 aaPredicted RBP15.39■□□□□ 0.05
SDF2-201ENST00000247020 ANKFY1Q9P2R3 1169 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 PAXBP1Q9Y5B6 917 aa15.39■□□□□ 0.05
SDF2-201ENST00000247020 A0A087WZ62 844 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 FAM189A1O60320 539 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 TBC1D8O95759 1140 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 MYL3P08590 195 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 FERP16591 822 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 STAT1P42224 750 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 ETF1P62495 437 aaKnown RBP15.38■□□□□ 0.05
SDF2-201ENST00000247020 PURAQ00577 322 aaKnown RBP15.38■□□□□ 0.05
SDF2-201ENST00000247020 ARHGEF6Q15052 776 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 ASTE1Q2TB18 679 aaPredicted RBP15.38■□□□□ 0.05
SDF2-201ENST00000247020 C15orf39Q6ZRI6 1047 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 KIAA0319LQ8IZA0 1049 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 ZNF784Q8NCA9 323 aaPredicted RBP15.38■□□□□ 0.05
SDF2-201ENST00000247020 FBXL13Q8NEE6 735 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 CGRRF1Q99675 332 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 FDXACB1Q9BRP7 624 aaPredicted RBP15.38■□□□□ 0.05
SDF2-201ENST00000247020 HAUS4Q9H6D7 363 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 SETD4Q9NVD3 440 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 RNF186Q9NXI6 227 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 MYO1AQ9UBC5 1043 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 SRRDQ9UH36 339 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 ATP8B3O60423 1300 aa15.38■□□□□ 0.05
SDF2-201ENST00000247020 RALGAPA2Q2PPJ7 1873 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 GFPT2O94808 682 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 RARBP10826 455 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 EIF4A3P38919 411 aaKnown RBP15.37■□□□□ 0.05
SDF2-201ENST00000247020 KIF11P52732 1056 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 KLHL30Q0D2K2 578 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 SPA17Q15506 151 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 AMHR2Q16671 573 aa15.37■□□□□ 0.05
SDF2-201ENST00000247020 ARHGAP29Q52LW3 1261 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms