RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 MAP4K3Q8IVH8 894 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 PPM1KQ8N3J5 372 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 PRELID2Q8N945 189 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 SEMA4DQ92854 862 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 HOMER2Q9NSB8 354 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 BCCIPQ9P287 314 aaKnown RBP eCLIP23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 PCYOX1Q9UHG3 505 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 TBX20Q9UMR3 447 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 COQ4Q9Y3A0 265 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 WDR64B1ANS9 1081 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 ANKRD63C9JTQ0 380 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 CYP26A1O43174 497 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 ATP9AO75110 1047 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 CCNE2O96020 404 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 MESDQ14696 234 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 KRT71Q3SY84 523 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 XKR9Q5GH70 373 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 PLA2G4FQ68DD2 849 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 KRT39Q6A163 491 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 TMEM161BQ8NDZ6 487 aa23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 NOVA2Q9UNW9 492 aaKnown RBP23.28■■□□□ 1.32
SH2D3A-201ENST00000245908 CYP1A2P05177 515 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 KRT76Q01546 638 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 SEL1L2Q5TEA6 688 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 ZDHHC24Q6UX98 284 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 SLC47A2Q86VL8 602 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 PARD3BQ8TEW8 1205 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 C18orf8Q96DM3 657 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 TRPC6Q9Y210 931 aa23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 ZNFX1Q9P2E3 1918 aaKnown RBP23.27■■□□□ 1.32
SH2D3A-201ENST00000245908 WNT10BO00744 389 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 GPC3P51654 580 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 NBPF9Q3BBW0 867 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 MICALCLQ6ZW33 695 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 HELQQ8TDG4 1101 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 PDCD2LQ9BRP1 358 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 EPB41L4BQ9H329 900 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 TMEM8AQ9HCN3 771 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 GGA2Q9UJY4 613 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 ZNRF3Q9ULT6 936 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 E7EVH7 732 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 MMEP08473 750 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 NUDT17P0C025 328 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 MYCLP12524 364 aaPredicted RBP23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 GBP1P32455 592 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 NPTX2P47972 431 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 SMTNP53814 917 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 C3orf20Q8ND61 904 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 ZNF564Q8TBZ8 553 aaPredicted RBP23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 TLCD1Q96CP7 247 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 VPS33BQ9H267 617 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 GRHL1Q9NZI5 618 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 CNOT8Q9UFF9 292 aaKnown RBP23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 GTF3C4Q9UKN8 822 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 SNX24Q9Y343 169 aa23.26■■□□□ 1.31
SH2D3A-201ENST00000245908 ATMINO43313 823 aaPredicted RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 PAEPP09466 180 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 LIG3P49916 1009 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 IFFO1Q0D2I5 559 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 ODF2Q5BJF6 829 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 ZDHHC14Q8IZN3 488 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 TMC2Q8TDI7 906 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 MAGOHBQ96A72 148 aaKnown RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 SAAL1Q96ER3 474 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 PXMP2Q9NR77 195 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 CHORDC1Q9UHD1 332 aaPredicted RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 TCEAL9Q9UHQ7 104 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 WDR81Q562E7 1941 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 CCDC169A6NNP5 214 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 PODXLO00592 558 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 MEFVO15553 781 aaPredicted RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 CNGA1P29973 690 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 PSEN1P49768 467 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 MAGOHP61326 146 aaKnown RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 CYP1B1Q16678 543 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 TTC27Q6P3X3 843 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 YTHDF3Q7Z739 585 aaKnown RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 RDM1Q8NG50 284 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 KAT2BQ92831 832 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 RMDN3Q96TC7 470 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 NUP85Q9BW27 656 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 PABPC3Q9H361 631 aaKnown RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 LRRC4CQ9HCJ2 640 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 ACP6Q9NPH0 428 aa23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 PPANQ9NQ55 473 aaKnown RBP23.25■■□□□ 1.31
SH2D3A-201ENST00000245908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.25■■□□□ 1.312e-6■■■■■ 96.1
SH2D3A-201ENST00000245908 CYP11B1P15538 503 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 PMS2P54278 862 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 PLTPP55058 493 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 CDR2Q01850 454 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 DMP1Q13316 513 aaPredicted RBP23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 FBXO25Q8TCJ0 367 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 CCDC127Q96BQ5 260 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 MFSD14AQ96MC6 490 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 FBXL18Q96ME1 805 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 UVRAGQ9P2Y5 699 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 DCDC2CA8MYV0 355 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 TRAPPC3O43617 180 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 KIAA0754O94854 1291 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms