RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GTF2H1P32780 548 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 CYLC1P35663 651 aaPredicted RBP20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 ACOT2P49753 483 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 MXI1P50539 228 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 MBTD1Q05BQ5 628 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 TRIM32Q13049 653 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 ATF7IP2Q5U623 682 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 TRIM65Q6PJ69 517 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 ZNF410Q86VK4 478 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 KIAA0319LQ8IZA0 1049 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 BAP1Q92560 729 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 SYN2Q92777 582 aaPredicted RBP20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 MTG1Q9BT17 334 aaPredicted RBP20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 INTS2Q9H0H0 1204 aaKnown RBP20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 GANQ9H2C0 597 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 IFT122Q9HBG6 1241 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 FBXL5Q9UKA1 691 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 PPP2R2CQ9Y2T4 447 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 DAAM1Q9Y4D1 1078 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 SMIM35A0A1B0GVV1 85 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 C17orf102A2RUQ5 167 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 IPO7O95373 1038 aaKnown RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 DLATP10515 647 aaKnown RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 CYP2C9P11712 490 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 HNRNPH3P31942 346 aaKnown RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PRMT2P55345 433 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 NLRP11P59045 1033 aaKnown RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 CDK17Q00537 523 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PPP3CAQ08209 521 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 KRT39Q6A163 491 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 WDR59Q6PJI9 974 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 RAD9BQ6WBX8 426 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 TSHZ1Q6ZSZ6 1077 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 TOGARAM2Q6ZUX3 1019 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 ZBTB33Q86T24 672 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 IFNLR1Q8IU57 520 aaPredicted RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 EHBP1Q8NDI1 1231 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 CHP1Q99653 195 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 FAM49AQ9H0Q0 323 aaPredicted RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 XPNPEP3Q9NQH7 507 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 GOLGA6L9A6NEM1 432 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 USP27XA6NNY8 438 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 LRRIQ3A6PVS8 624 aaPredicted RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PMM2O15305 246 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PGK1P00558 417 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 EDN1P05305 212 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 GPC3P51654 580 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 MCCD1P59942 119 aaPredicted RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 RAPGEF1Q13905 1077 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 MTF1Q14872 753 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PSMD6Q15008 389 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PTPN14Q15678 1187 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 FAM187BQ17R55 369 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 MPZL3Q6UWV2 235 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 SRGAP1Q7Z6B7 1085 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 CCDC170Q8IYT3 715 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PPP1R13BQ96KQ4 1090 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 PRIMPOLQ96LW4 560 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 CCDC42Q96M95 316 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 TMEM8AQ9HCN3 771 aa20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 RBAKQ9NYW8 714 aaPredicted RBP20.32■□□□□ 0.84
TNFSF9-201ENST00000245817 MBLAC1A4D2B0 266 aaPredicted RBP20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 ERLIN2O94905 339 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 CCND3P30281 292 aaPredicted RBP20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 APBA1Q02410 837 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 MCL1Q07820 350 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 PLEKHO2Q8TD55 490 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 TMEM117Q9H0C3 514 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 DEF6Q9H4E7 631 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 NHEJ1Q9H9Q4 299 aaPredicted RBP20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 MYO6Q9UM54 1294 aa20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 EPN1Q9Y6I3 576 aaPredicted RBP20.31■□□□□ 0.84
TNFSF9-201ENST00000245817 MYADML2A6NDP7 307 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 OGTO15294 1046 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 MYCNP04198 464 aaPredicted RBP20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 TNNI1P19237 187 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 NCBP1Q09161 790 aaKnown RBP20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 ZNF568Q3ZCX4 644 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 SLC9C1Q4G0N8 1177 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 C1orf220Q5T0J3 134 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 FMNL3Q8IVF7 1028 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 PXYLP1Q8TE99 480 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 C16orf45Q96MC5 204 aaPredicted RBP20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 POP1Q99575 1024 aaKnown RBP20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 DESI2Q9BSY9 194 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 GCOM2Q9BZD3 368 aaPredicted RBP20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 HAPLN2Q9GZV7 340 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 MINDY3Q9H8M7 445 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 TNFSF13BQ9Y275 285 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 FHOD1Q9Y613 1164 aa20.3■□□□□ 0.84
TNFSF9-201ENST00000245817 TTLL13PA6NNM8 815 aa20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 NDUFA10O95299 355 aa20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 RFX1P22670 979 aa20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 ASIC2Q16515 512 aa20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 TDRD12Q587J7 1177 aaKnown RBP20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 PPP1R13LQ8WUF5 828 aa20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 SIX2Q9NPC8 291 aa20.29■□□□□ 0.84
TNFSF9-201ENST00000245817 HDAC6Q9UBN7 1215 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms