RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SEZ6Q53EL9 994 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 ADCK1Q86TW2 530 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 CAAP1Q9H8G2 361 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 LOC100653049A0A140TA62 436 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 KRT34O76011 436 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 TPP2P29144 1249 aaPredicted RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 PRDX5P30044 214 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 NR1I3Q14994 352 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 OLFML3Q9NRN5 406 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 MYMKA6NI61 221 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 ZNF513Q8N8E2 541 aaPredicted RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 KIF1BO60333 1816 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 CASP4P49662 377 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 ARL2BPQ9Y2Y0 163 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 SNX5Q9Y5X3 404 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 UBOX5O94941 541 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 C18orf8Q96DM3 657 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 CEP95Q96GE4 821 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 LMNAP02545 664 aaKnown RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 GAP43P17677 238 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 CNGA3Q16281 694 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 KIF17Q9P2E2 1029 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 UTYO14607 1347 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 KLC1Q07866 573 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 BPIFA3Q9BQP9 254 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 KIF1CO43896 1103 aaKnown RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 GALCP54803 685 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 VCPP55072 806 aaKnown RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 GLE1Q53GS7 698 aaKnown RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 CCDC81Q6ZN84 652 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 TAGAPQ8N103 731 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
RIF1-201ENST00000243326 IQCDQ96DY2 449 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 TMEM165Q9HC07 324 aa7.97□□□□□ -1.13
RIF1-201ENST00000243326 DFFAO00273 331 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 YWHAEP62258 255 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 HERVK_113P62684 666 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 ROR1Q01973 937 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 TRIM42Q8IWZ5 723 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 PARP8Q8N3A8 854 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 CCHCR1Q8TD31 782 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.96□□□□□ -1.132e-6■■□□□ 13.3
RIF1-201ENST00000243326 C20orf96Q9NUD7 363 aaPredicted RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 DDX18Q9NVP1 670 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 LRRC7Q96NW7 1537 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 ERVK-24P63145 666 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 ZFYVE19Q96K21 471 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 FUT8Q9BYC5 575 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 KCNN4O15554 427 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 PYGBP11216 843 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 NQO1P15559 274 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 UBA6A0AVT1 1052 aaPredicted RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 UPP2O95045 317 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 BMP3P12645 472 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 SMARCA1P28370 1054 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 POLR2BP30876 1174 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 EIF3EP60228 445 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 MRPS15P82914 257 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 DHX35Q9H5Z1 703 aaKnown RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 KLHL8Q9P2G9 620 aaPredicted RBP7.96□□□□□ -1.13
RIF1-201ENST00000243326 H0YIN7 160 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 FLCNQ8NFG4 579 aa7.96□□□□□ -1.13
RIF1-201ENST00000243326 GH2P01242 217 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 GNA15P30679 374 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 ITGA8P53708 1063 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 ANTXR2P58335 489 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 AGPAT1Q99943 283 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 GTPBP10A4D1E9 387 aaKnown RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 ARHGDIAP52565 204 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 TRIM60Q495X7 471 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 BZW1Q7L1Q6 419 aaKnown RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 ADD3Q9UEY8 706 aaKnown RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 HSD17B3P37058 310 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 LMNB2Q03252 620 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 KIAA1755Q5JYT7 1200 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 ARMC3Q5W041 872 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 AADACL2Q6P093 401 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 ATP6V1G2O95670 118 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 PFKFB3Q16875 520 aaPredicted RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 FASTKD1Q53R41 847 aaKnown RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 RNASELQ05823 741 aaKnown RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 SENP7Q9BQF6 1050 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 SEPT2Q15019 361 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 NACC1Q96RE7 527 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 POLR3FQ9H1D9 316 aaPredicted RBP7.96□□□□□ -1.14
RIF1-201ENST00000243326 ARL4AP40617 200 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 MYCBPAPQ8TBZ2 947 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 MCEEQ96PE7 176 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 SIKE1Q9BRV8 207 aa7.96□□□□□ -1.14
RIF1-201ENST00000243326 PRR36Q9H6K5 1346 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CFAP73A6NFT4 308 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SPTLC1O15269 473 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 MYL1P05976 194 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CSE1LP55060 971 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 OTUD4Q01804 1114 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 STK4Q13043 487 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SLC29A2Q14542 456 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 FUT11Q495W5 492 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 BARGINQ6ZT62 677 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms