RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CALCAP01258 141 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 RARAP10276 462 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 MYCLP12524 364 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 MAP2K2P36507 400 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 ADCY1Q08828 1119 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 EPS8L1Q8TE68 723 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 LRRC19Q9H756 370 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 ACP6Q9NPH0 428 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 PFASO15067 1338 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 CYP1A2P05177 515 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 MPP2Q14168 576 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 TMEM63BQ5T3F8 832 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 DNAJC17Q9NVM6 304 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 CREB1P16220 341 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 COMTP21964 271 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 ZNF268Q14587 947 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 CLUL1Q15846 466 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 SNCBQ16143 134 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 NOP9Q86U38 636 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 HOOK3Q86VS8 718 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC25Q86WR0 208 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 KAT5Q92993 513 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 KREMEN1Q96MU8 473 aa12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 CTDP1Q9Y5B0 961 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-201ENST00000243253 SNX3O60493 162 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 GGPS1O95749 300 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 FTLP02792 175 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 C2CD6Q53TS8 623 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC137Q6PK04 289 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 ASRGL1Q7L266 308 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 CYFIP1Q7L576 1253 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC114Q96M63 670 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 UNC45AQ9H3U1 944 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 PODXLO00592 558 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 KRT13P13646 458 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 FGFR4P22455 802 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 VPS41P49754 854 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 MYL7Q01449 175 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 GPATCH11Q8N954 259 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 FMO1Q01740 532 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 MGAT5Q09328 741 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 PRR12Q9ULL5 1215 aa12.85□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 SGPL1O95470 568 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 GZMAP12544 262 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 TAB3Q8N5C8 712 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 CCDC197Q8NCU1 140 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 PI4KBQ9UBF8 816 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 DHX15O43143 795 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 RTN2O75298 545 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 TCEA3O75764 348 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 HSPA6P17066 643 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 CRELD2Q6UXH1 353 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 SLC13A5Q86YT5 568 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 ZNF668Q96K58 619 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 SYNPO2Q9UMS6 1093 aa12.84□□□□□ -0.35
SEC61A1-201ENST00000243253 FSCN2O14926 492 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 MAPK13O15264 365 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 P4HA2O15460 535 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 GJB6O95452 261 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 CETPP11597 493 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 PRELPP51888 382 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 GPC5P78333 572 aa12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 MRRFQ96E11 262 aaKnown RBP12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.35
SEC61A1-201ENST00000243253 BRWD3Q6RI45 1802 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 CCDC172P0C7W6 258 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 NCALDP61601 193 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 IFFO1Q0D2I5 559 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 TRPM8Q7Z2W7 1104 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 CPLX4Q7Z7G2 160 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 RPUSD2Q8IZ73 545 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms