RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CCDC70Q6NSX1 233 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 PPM1KQ8N3J5 372 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 AGPAT1Q99943 283 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 RHOXF2Q9BQY4 288 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 SMARCAD1Q9H4L7 1026 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 CCL15-CCL14A0A0B4J2E2 113 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 DLATP10515 647 aaKnown RBP25.14■■□□□ 1.62
MSX2-201ENST00000239243 CAPSQ13938 189 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 MXD4Q14582 209 aaPredicted RBP25.14■■□□□ 1.62
MSX2-201ENST00000239243 CCL15Q16663 113 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 SV2AQ7L0J3 742 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 ANKRD23Q86SG2 305 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 ABRAQ8N0Z2 381 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 OLIG1Q8TAK6 271 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 MS4A4AQ96JQ5 239 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 FNBP1Q96RU3 617 aa25.14■■□□□ 1.62
MSX2-201ENST00000239243 DIS3Q9Y2L1 958 aaKnown RBP25.14■■□□□ 1.62
MSX2-201ENST00000239243 TMEM253P0C7T8 217 aa25.14■■□□□ 1.61
MSX2-201ENST00000239243 CLDN10P78369 228 aa25.14■■□□□ 1.61
MSX2-201ENST00000239243 ENOSF1Q7L5Y1 443 aa25.14■■□□□ 1.61
MSX2-201ENST00000239243 SYCE1Q8N0S2 351 aa25.14■■□□□ 1.61
MSX2-201ENST00000239243 COG1Q8WTW3 980 aa25.14■■□□□ 1.61
MSX2-201ENST00000239243 CTNNBL1Q8WYA6 563 aaPredicted RBP25.14■■□□□ 1.61
MSX2-201ENST00000239243 POP1Q99575 1024 aaKnown RBP25.14■■□□□ 1.61
MSX2-201ENST00000239243 NCK2O43639 380 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 STRNO43815 780 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 GALCP54803 685 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 ARMCX2Q7L311 632 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 SEMA4DQ92854 862 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 TARSL2A2RTX5 802 aaKnown RBP25.13■■□□□ 1.61
MSX2-201ENST00000239243 TULP1O00294 542 aaPredicted RBP25.13■■□□□ 1.61
MSX2-201ENST00000239243 PDE2AO00408 941 aaPredicted RBP25.13■■□□□ 1.61
MSX2-201ENST00000239243 CFAP221Q4G0U5 840 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 WDR93Q6P2C0 686 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 ZPBP2Q6X784 338 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 FAM71AQ8IYT1 594 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 TAS1R2Q8TE23 839 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 SHC3Q92529 594 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 MORF4L1Q9UBU8 362 aa25.13■■□□□ 1.61
MSX2-201ENST00000239243 NCANO14594 1321 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 MCM3APO60318 1980 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 BTBD19C9JJ37 291 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 FTCDO95954 541 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 POTEJP0CG39 1038 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 MARK3P27448 753 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 PRPF31Q8WWY3 499 aaKnown RBP25.12■■□□□ 1.61
MSX2-201ENST00000239243 PNKPQ96T60 521 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 TOPORSQ9NS56 1045 aaPredicted RBP25.12■■□□□ 1.61
MSX2-201ENST00000239243 SEPT11Q9NVA2 429 aaKnown RBP25.12■■□□□ 1.61
MSX2-201ENST00000239243 IVNS1ABPQ9Y6Y0 642 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 IGKV6-21A0A0C4DH24 114 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 CES2O00748 559 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 PLCB4Q15147 1175 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 ZNF792Q3KQV3 632 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 C15orf39Q6ZRI6 1047 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 TPCN2Q8NHX9 752 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 RFFLQ8WZ73 363 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 TAF4BQ92750 862 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 CALR3Q96L12 384 aaKnown RBP25.12■■□□□ 1.61
MSX2-201ENST00000239243 MSTO1Q9BUK6 570 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 GBA2Q9HCG7 927 aaPredicted RBP25.12■■□□□ 1.61
MSX2-201ENST00000239243 VTA1Q9NP79 307 aa25.12■■□□□ 1.61
MSX2-201ENST00000239243 A0A0B4J269 797 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 MATR3P43243 847 aaKnown RBP eCLIP25.11■■□□□ 1.61
MSX2-201ENST00000239243 ZNF467Q7Z7K2 595 aaPredicted RBP25.11■■□□□ 1.61
MSX2-201ENST00000239243 ZBTB8OSQ8IWT0 167 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 MMGT1Q8N4V1 131 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 LRRC57Q8N9N7 239 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 HELQQ8TDG4 1101 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 KREMEN1Q96MU8 473 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 TARS2Q9BW92 718 aaKnown RBP25.11■■□□□ 1.61
MSX2-201ENST00000239243 C2orf40Q9H1Z8 148 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 PLXNB2O15031 1838 aa25.11■■□□□ 1.61
MSX2-201ENST00000239243 ANKRD62A6NC57 917 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 HBP1O60381 514 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 ADORA2AP29274 412 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 CXCR5P32302 372 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 USP8P40818 1118 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 GCNT1Q02742 428 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 LAMC2Q13753 1193 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 TRIM50Q86XT4 487 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 TNNI1P19237 187 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 NLRP11P59045 1033 aaKnown RBP25.1■■□□□ 1.61
MSX2-201ENST00000239243 RPS6KA1Q15418 735 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 CDCA2Q69YH5 1023 aaPredicted RBP25.1■■□□□ 1.61
MSX2-201ENST00000239243 C2orf69Q8N8R5 385 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 SPATA4Q8NEY3 305 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 BRI3BPQ8WY22 251 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 PSMB7Q99436 277 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 MRPL4Q9BYD3 311 aaKnown RBP25.1■■□□□ 1.61
MSX2-201ENST00000239243 RBAKQ9NYW8 714 aaPredicted RBP25.1■■□□□ 1.61
MSX2-201ENST00000239243 ANKFY1Q9P2R3 1169 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 TRPC6Q9Y210 931 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 PLXNA1Q9UIW2 1896 aa25.1■■□□□ 1.61
MSX2-201ENST00000239243 PRPF4BQ13523 1007 aaKnown RBP25.09■■□□□ 1.61
MSX2-201ENST00000239243 KAT5Q92993 513 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 SUGCTQ9HAC7 445 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 C1orf112Q9NSG2 853 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 FAM53CQ9NYF3 392 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 SPDYE4A6NLX3 237 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms