RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 CHMP4BP1P59074 171 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 FOXK2Q01167 660 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 TNFAIP2Q03169 654 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 MAPK7Q13164 816 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 TRIM14Q14142 442 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 MAN2A1Q16706 1144 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 TCERG1LQ5VWI1 586 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 IQSEC1Q6DN90 963 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 MAMDC4Q6UXC1 1216 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 EPM2AIP1Q7L775 607 aaPredicted RBP10.67□□□□□ -0.7
TTC1-201ENST00000231238 PLPPR4Q7Z2D5 763 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 HAUS6Q7Z4H7 955 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 DAW1Q8N136 415 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 SIX5Q8N196 739 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 NPLOC4Q8TAT6 608 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 DEPTORQ8TB45 409 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 AFAP1L1Q8TED9 768 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 CPLX3Q8WVH0 158 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 CAPNS2Q96L46 248 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 JPH2Q9BR39 696 aaPredicted RBP10.67□□□□□ -0.7
TTC1-201ENST00000231238 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
TTC1-201ENST00000231238 KCTD10Q9H3F6 313 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 ZNF215Q9UL58 517 aaPredicted RBP10.67□□□□□ -0.7
TTC1-201ENST00000231238 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
TTC1-201ENST00000231238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
TTC1-201ENST00000231238 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 IGKV6D-21A0A0A0MT36 114 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 LRRC10BA6NIK2 292 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 LRRIQ4A6NIV6 560 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 AKR1B15C9JRZ8 316 aaPredicted RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 SNAI1O95863 264 aaPredicted RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 YY1P25490 414 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 CYP2J2P51589 502 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 STRN3Q13033 797 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 VWA3BQ502W6 1294 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 ZCWPW2Q504Y3 356 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 BRDTQ58F21 947 aaPredicted RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 GJC2Q5T442 439 aaPredicted RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 TAPT1Q6NXT6 567 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 LRRC55Q6ZSA7 311 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 IRF2BP1Q8IU81 584 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 KSR1Q8IVT5 923 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 LRRC8AQ8IWT6 810 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 CCDC112Q8NEF3 446 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 ATP8B4Q8TF62 1192 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 AFG1LQ8WV93 481 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 TCP11Q8WWU5 503 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 GTPBP3Q969Y2 492 aaKnown RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 TMEM143Q96AN5 459 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 APBA2Q99767 749 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 AP5M1Q9H0R1 490 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 METTL14Q9HCE5 456 aaKnown RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 INTS13Q9NVM9 706 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 ERAP1Q9NZ08 941 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 ARMCX3Q9UH62 379 aaPredicted RBP10.66□□□□□ -0.7
TTC1-201ENST00000231238 TRAF3IP3Q9Y228 551 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 EMSYQ7Z589 1322 aa10.66□□□□□ -0.7
TTC1-201ENST00000231238 RBM47A0AV96 593 aaKnown RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 DENND3A2RUS2 1198 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 HBP1O60381 514 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 EXOC3O60645 756 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 AOC2O75106 756 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 LGR5O75473 907 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 SKILP12757 684 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 KRT13P13646 458 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 TRIM21P19474 475 aaKnown RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 PSMC4P43686 418 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 NPTX2P47972 431 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 SOX10P56693 466 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 IGBP1P78318 339 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 ARHGAP1Q07960 439 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 LRMPQ12912 555 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 DUSP28Q4G0W2 176 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 CRTC2Q53ET0 693 aaPredicted RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 DCAF17Q5H9S7 520 aaPredicted RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 CNGA4Q8IV77 575 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 FAM186BQ8IYM0 893 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 ZSCAN1Q8NBB4 408 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 ZNF397Q8NF99 534 aaPredicted RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 PPTC7Q8NI37 304 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 CACTINQ8WUQ7 758 aaKnown RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 HVCN1Q96D96 273 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 PCYT2Q99447 389 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 NDST4Q9H3R1 872 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 RUBCNLQ9H714 662 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 CGNQ9P2M7 1197 aaKnown RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 FAM184BQ9ULE4 1060 aa10.65□□□□□ -0.7
TTC1-201ENST00000231238 ZNFX1Q9P2E3 1918 aaKnown RBP10.65□□□□□ -0.7
TTC1-201ENST00000231238 DOCK5Q9H7D0 1870 aa10.65□□□□□ -0.71
TTC1-201ENST00000231238 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.64□□□□□ -0.71
TTC1-201ENST00000231238 A0A1W2PQC6 194 aa10.64□□□□□ -0.71
TTC1-201ENST00000231238 SLC16A3O15427 465 aaKnown RBP10.64□□□□□ -0.71
TTC1-201ENST00000231238 DYNC1LI2O43237 492 aaPredicted RBP10.64□□□□□ -0.71
TTC1-201ENST00000231238 GAS2O43903 313 aaKnown RBP10.64□□□□□ -0.71
TTC1-201ENST00000231238 STBD1O95210 358 aa10.64□□□□□ -0.71
TTC1-201ENST00000231238 LGALS2P05162 132 aa10.64□□□□□ -0.71
TTC1-201ENST00000231238 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
TTC1-201ENST00000231238 ATP4AP20648 1035 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms