RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 TAF1BQ53T94 588 aaPredicted RBP11.04□□□□□ -0.64
MCM3-201ENST00000229854 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
MCM3-201ENST00000229854 MIGA2Q7L4E1 593 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 KRT35Q92764 455 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 IFT43Q96FT9 208 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 UBA5Q9GZZ9 404 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 THAP2Q9H0W7 228 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 GCNT4Q9P109 453 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 ASIC3Q9UHC3 531 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 ZNF646O15015 1829 aaPredicted RBP11.04□□□□□ -0.64
MCM3-201ENST00000229854 PASKQ96RG2 1323 aa11.04□□□□□ -0.64
MCM3-201ENST00000229854 hCG_2014768A0A024R1R8 64 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SLC37A4O43826 429 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TTLL1O95922 423 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 ETS2P15036 469 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 VCAM1P19320 739 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TPP2P29144 1249 aaPredicted RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 PRKCIP41743 596 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 PPP4CP60510 307 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 CDR2Q01850 454 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 ECM1Q16610 540 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SEL1L2Q5TEA6 688 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 EPM2AIP1Q7L775 607 aaPredicted RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 UBL4BQ8N7F7 174 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SCFD1Q8WVM8 642 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 STMN2Q93045 179 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 ART4Q93070 314 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 DNAJC19Q96DA6 116 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 CHORDC1Q9UHD1 332 aaPredicted RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 ALG6Q9Y672 507 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TCRBV7S2A1N4TA0A589 114 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 E9PMD0 336 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 NOVP48745 357 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 ERFP50548 548 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TRIP13Q15645 432 aaPredicted RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 DSTYKQ6XUX3 929 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 PPP1R21Q6ZMI0 780 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 LRRC74BQ6ZQY2 392 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 RFX8Q6ZV50 586 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 ATL2Q8NHH9 583 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 NRG4Q8WWG1 115 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TMEM165Q9HC07 324 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 ZFP69BQ9UJL9 534 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 C10orf71Q711Q0 1435 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 MAP3K7O43318 606 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TMEM253P0C7T8 217 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 CHKAP35790 457 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 VPS41P49754 854 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 TMED2Q15363 201 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 CNPY1Q3B7I2 92 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
MCM3-201ENST00000229854 ZWILCHQ9H900 591 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 MKNK2Q9HBH9 465 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.03□□□□□ -0.64
MCM3-201ENST00000229854 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
MCM3-201ENST00000229854 SYNGAP1Q96PV0 1343 aa11.02□□□□□ -0.64
MCM3-201ENST00000229854 RASA4BC9J798 803 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
MCM3-201ENST00000229854 RASA4O43374 803 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 LMNB1P20700 586 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 PPATQ06203 517 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 MESDQ14696 234 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 KPNB1Q14974 876 aaKnown RBP11.02□□□□□ -0.65
MCM3-201ENST00000229854 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.65
MCM3-201ENST00000229854 C4orf50Q6ZRC1 276 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.65
MCM3-201ENST00000229854 GPBP1Q86WP2 473 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 PTPRN2Q92932 1015 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 DYDC2Q96IM9 177 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 SETDB2Q96T68 719 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 TAS2R14Q9NYV8 317 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 PDP2Q9P2J9 529 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 PCYOX1Q9UHG3 505 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 NAALADL1Q9UQQ1 740 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 ECEL1O95672 775 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 EYA4O95677 639 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 IMPDH2P12268 514 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 PTPN4P29074 926 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
MCM3-201ENST00000229854 MARSP56192 900 aaKnown RBP11.02□□□□□ -0.65
MCM3-201ENST00000229854 CLUL1Q15846 466 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 NCAPG2Q86XI2 1143 aa11.02□□□□□ -0.65
MCM3-201ENST00000229854 SCYL3Q8IZE3 742 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms