RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 FMO2Q99518 471 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 PIDD1Q9HB75 910 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 PARVGQ9HBI0 331 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 INTUQ9ULD6 942 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TMEM110-MUSTN1A8MSY1 372 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLC26A4O43511 780 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TNFAIP3P21580 790 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ERFP50548 548 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 PTENP60484 403 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 DR1Q01658 176 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 BIRC3Q13489 604 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 LRRC14Q15048 493 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM178BQ8IXR5 827 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 FBXO25Q8TCJ0 367 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 C18orf8Q96DM3 657 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 PCIF1Q9H4Z3 704 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 PRDM16Q9HAZ2 1276 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 AGPAT3Q9NRZ7 376 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZDHHC18Q9NUE0 388 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 PRR12Q9ULL5 1215 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 MYH11P35749 1972 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 IGF2BP3O00425 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 FOSP01100 380 aaPredicted RBP10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 BMP3P12645 472 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 LMNB1P20700 586 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 BAG6P46379 1132 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 RAB27AP51159 221 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ATP11AP98196 1134 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ABCB5Q2M3G0 1257 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ODR4Q5SWX8 454 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 DUPD1Q68J44 220 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TATDN1Q6P1N9 297 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRIM74Q86UV6 250 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRIM73Q86UV7 250 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 SH2D3AQ9BRG2 576 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 TXLNGYQ9BZA5 131 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 APEX2Q9UBZ4 518 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ALG6Q9Y672 507 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 USH1CQ9Y6N9 552 aa10.1□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZNF236Q9UL36 1845 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 CCT8L1PA6NM43 557 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 PSMD10O75832 226 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 MMEP08473 750 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 DRP2Q13474 957 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 MTMR3Q13615 1198 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TBC1D10BQ4KMP7 808 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 LRRC23Q53EV4 343 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRMT1LQ7Z2T5 733 aaKnown RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZDHHC15Q96MV8 337 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ERP44Q9BS26 406 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM114A2Q9NRY5 505 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRIM33Q9UPN9 1127 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 DAAM1Q9Y4D1 1078 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 NCANO14594 1321 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 FRMPD4Q14CM0 1322 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 PPFIA2O75334 1257 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 KRT13P13646 458 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 GAP43P17677 238 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 CCDC38Q502W7 563 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 AGBL2Q5U5Z8 902 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 KAT5Q92993 513 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ELMO3Q96BJ8 720 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZFATQ9P243 1243 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZNF219Q9P2Y4 722 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TCRBV7S2A1N4TA0A589 114 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 EIF3DO15371 548 aaKnown RBP eCLIP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 EXOC3O60645 756 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 HIP1RO75146 1068 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ARP10275 920 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 VCAM1P19320 739 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ANXA13P27216 316 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ALDH5A1P51649 535 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 MYL7Q01449 175 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZDHHC24Q6UX98 284 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TMEM179Q6ZVK1 233 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 JAMLQ86YT9 394 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ARHGEF19Q8IW93 802 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 SYCP3Q8IZU3 236 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ANKRD42Q8N9B4 389 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 LMO3Q8TAP4 145 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 CARD9Q9H257 536 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 TDRD3Q9H7E2 651 aaKnown RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 UBE2TQ9NPD8 197 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 ABCF3Q9NUQ8 709 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 DMAC2Q9NW81 257 aa10.09□□□□□ -0.79
HLA-DOA-201ENST00000229829 PARP14Q460N5 1801 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 UBOX5O94941 541 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 FTLP02792 175 aaPredicted RBP10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 SCNN1BP51168 640 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 IFI35P80217 286 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms