RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FBXL13Q8NEE6 735 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 SPATA20Q8TB22 786 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 PABPC3Q9H361 631 aaKnown RBP14.64□□□□□ -0.07
NFKB1-201ENST00000226574 HSPBP1Q9NZL4 362 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 SALL4Q9UJQ4 1053 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 LUC7L3O95232 432 aaKnown RBP14.64□□□□□ -0.07
NFKB1-201ENST00000226574 P3H1Q32P28 736 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 SEZ6Q53EL9 994 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 PRR5LQ6MZQ0 368 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 RINT1Q6NUQ1 792 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 NCAPG2Q86XI2 1143 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 NLGN1Q8N2Q7 840 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 CBWD1Q9BRT8 395 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 ITSN1Q15811 1721 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 WDR64B1ANS9 1081 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 PHF2O75151 1096 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 ITGA8P53708 1063 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 COG7P83436 770 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 ZNF844Q08AG5 666 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 GRAMD1BQ3KR37 738 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 FAM161BQ96MY7 647 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 ZNF408Q9H9D4 720 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 SGPL1O95470 568 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 AGTP01019 485 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 MAPK7Q13164 816 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 GIT2Q14161 759 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 CCDC14Q49A88 953 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 LDHDQ86WU2 507 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 PIP4K2CQ8TBX8 421 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 SNF8Q96H20 258 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 TRIM55Q9BYV6 548 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 WNT8AQ9H1J5 351 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 TRABDQ9H4I3 376 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 MSH4O15457 936 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 UBOX5O94941 541 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 AARSP49588 968 aaKnown RBP eCLIP14.63□□□□□ -0.07
NFKB1-201ENST00000226574 KDSRQ06136 332 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 GRM1Q13255 1194 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 RHPN2Q8IUC4 686 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 ZBTB8OSQ8IWT0 167 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 CNKSR1Q969H4 720 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 SCYL1Q96KG9 808 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 DNAI2Q9GZS0 605 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 SUCLA2Q9P2R7 463 aaPredicted RBP14.63□□□□□ -0.07
NFKB1-201ENST00000226574 SCOCQ9UIL1 159 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 PRR12Q9ULL5 1215 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 ARL2BPQ9Y2Y0 163 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 RTN2O75298 545 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 CALCAP01258 141 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 P4HBP07237 508 aaKnown RBP14.63□□□□□ -0.07
NFKB1-201ENST00000226574 GNA15P30679 374 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 LRIG3Q6UXM1 1119 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 CCDC97Q96F63 343 aaPredicted RBP14.63□□□□□ -0.07
NFKB1-201ENST00000226574 PLEKHG2Q9H7P9 1386 aa14.63□□□□□ -0.07
NFKB1-201ENST00000226574 TJP3O95049 919 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 CPP00450 1065 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 SKIP12755 728 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 FUT2Q10981 343 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 KCNMA1Q12791 1236 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 SMTNL2Q2TAL5 461 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 FBXO41Q8TF61 875 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 DHX38Q92620 1227 aaKnown RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 CALR3Q96L12 384 aaKnown RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 TSC22D3Q99576 134 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 UBN1Q9NPG3 1134 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 AGPAT3Q9NRZ7 376 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 DIS3Q9Y2L1 958 aaKnown RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 PIAS1O75925 651 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 TMEM253P0C7T8 217 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 TARSP26639 723 aaKnown RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 CDR2Q01850 454 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 PCGF5Q86SE9 256 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 CDR2LQ86X02 465 aaPredicted RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 GPR75-ASB3A0A0A6YYF3 556 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 TISP43B9A030 160 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 DDX3XO00571 662 aaKnown RBP eCLIP14.62□□□□□ -0.073e-9■■□□□ 12.8
NFKB1-201ENST00000226574 KRT10P13645 584 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 FAF2Q96CS3 445 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 MPHOSPH6Q99547 160 aaKnown RBP14.62□□□□□ -0.07
NFKB1-201ENST00000226574 FGFBP2Q9BYJ0 223 aa14.62□□□□□ -0.07
NFKB1-201ENST00000226574 RALAP11233 206 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ECE1P42892 770 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 AGBL2Q5U5Z8 902 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 TRIM50Q86XT4 487 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 CBWD2Q8IUF1 395 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 MCUQ8NE86 351 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ATL2Q8NHH9 583 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 CARD9Q9H257 536 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 HESX1Q9UBX0 185 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 E2F8A0AVK6 867 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 COPEO14579 308 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 OPLAHO14841 1288 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 HAUS5O94927 633 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 NOP14P78316 857 aaKnown RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 SNRNP35Q16560 246 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms