RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 UBE4BO95155 1302 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 ZNF623O75123 536 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 CD44P16070 742 aaKnown RBP16.41■□□□□ 0.22
RPA3-201ENST00000223129 ATP2A2P16615 1042 aaKnown RBP16.41■□□□□ 0.22
RPA3-201ENST00000223129 RAB27AP51159 221 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 OSTNP61366 133 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 PRPF38BQ5VTL8 546 aaKnown RBP16.41■□□□□ 0.22
RPA3-201ENST00000223129 FAM43BQ6ZT52 329 aaPredicted RBP16.41■□□□□ 0.22
RPA3-201ENST00000223129 ZNF598Q86UK7 904 aaKnown RBP16.41■□□□□ 0.22
RPA3-201ENST00000223129 THNSL1Q8IYQ7 743 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 SNTG2Q9NY99 539 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 LRFN2Q9ULH4 789 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 CLIC2O15247 247 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 FGFR1P11362 822 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 AKAP5P24588 427 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 GATMP50440 423 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 MCL1Q07820 350 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 NOLC1Q14978 699 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPA3-201ENST00000223129 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
RPA3-201ENST00000223129 MRPL10Q7Z7H8 261 aaKnown RBP16.4■□□□□ 0.22
RPA3-201ENST00000223129 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 GUF1Q8N442 669 aaKnown RBP16.4■□□□□ 0.22
RPA3-201ENST00000223129 ZSWIM2Q8NEG5 633 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 POMGNT1Q8WZA1 660 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 CBWD1Q9BRT8 395 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 KCTD10Q9H3F6 313 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 PCIF1Q9H4Z3 704 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 A0A0B4J269 797 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 EOMESO95936 686 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 MCF2P10911 925 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 SKIP12755 728 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 DCAF4L1Q3SXM0 396 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 AGMOQ6ZNB7 445 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 NPAS4Q8IUM7 802 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 TRIML1Q8N9V2 468 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 SLC9A7Q96T83 725 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 MSTO1Q9BUK6 570 aa16.4■□□□□ 0.22
RPA3-201ENST00000223129 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
RPA3-201ENST00000223129 STAG3L1P0CL83 205 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 ITGA4P13612 1032 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 RABGGTBP53611 331 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 SKOR2Q2VWA4 1001 aaPredicted RBP16.39■□□□□ 0.21
RPA3-201ENST00000223129 SLFN12LQ6IEE8 588 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 PHOSPHO2Q8TCD6 241 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 ZBED2Q9BTP6 218 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 AGPAT3Q9NRZ7 376 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 RNF19AQ9NV58 838 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 PARP2Q9UGN5 583 aa16.39■□□□□ 0.21
RPA3-201ENST00000223129 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 KIF20AO95235 890 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 GJB5O95377 273 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 TNFSF9P41273 254 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 ARMCX5Q6P1M9 558 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 PGBD4Q96DM1 585 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 SAAL1Q96ER3 474 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 CXCL16Q9H2A7 254 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 KLK14Q9P0G3 267 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 AGO2Q9UKV8 859 aaKnown RBP16.38■□□□□ 0.21
RPA3-201ENST00000223129 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 FAM189A1O60320 539 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 DGKIO75912 1065 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 ACOT2P49753 483 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 AFF1P51825 1210 aaKnown RBP16.38■□□□□ 0.21
RPA3-201ENST00000223129 COBLL1Q53SF7 1204 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 CLLU1OSQ5K130 101 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 KLHL10Q6JEL2 608 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 HS2ST1Q7LGA3 356 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 APBB1IPQ7Z5R6 666 aaPredicted RBP16.38■□□□□ 0.21
RPA3-201ENST00000223129 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
RPA3-201ENST00000223129 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
RPA3-201ENST00000223129 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
RPA3-201ENST00000223129 TYW1Q9NV66 732 aaKnown RBP16.38■□□□□ 0.21
RPA3-201ENST00000223129 PDXKO00764 312 aa16.37■□□□□ 0.21
RPA3-201ENST00000223129 OGTO15294 1046 aa16.37■□□□□ 0.21
RPA3-201ENST00000223129 MYOGP15173 224 aa16.37■□□□□ 0.21
RPA3-201ENST00000223129 GARTP22102 1010 aa16.37■□□□□ 0.21
RPA3-201ENST00000223129 GRM5P41594 1212 aa16.37■□□□□ 0.21
RPA3-201ENST00000223129 PMS1P54277 932 aaKnown RBP16.37■□□□□ 0.21
RPA3-201ENST00000223129 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
RPA3-201ENST00000223129 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.36■□□□□ 0.21
RPA3-201ENST00000223129 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.36■□□□□ 0.21
RPA3-201ENST00000223129 TRIM49BA6NDI0 452 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 TLL1O43897 1013 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 OFD1O75665 1012 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 RECQL4O94761 1208 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 CYP2J2P51589 502 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 NLRP12P59046 1061 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 PAN2Q504Q3 1202 aaKnown RBP16.36■□□□□ 0.21
RPA3-201ENST00000223129 HACE1Q8IYU2 909 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
RPA3-201ENST00000223129 ACAP3Q96P50 834 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms