RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 FAM118BQ9BPY3 351 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 SEMA4AQ9H3S1 761 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 A0A087WUV0 522 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-201ENST00000221232 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 RPL21P46778 160 aaKnown RBP15.73■□□□□ 0.11
CNOT3-201ENST00000221232 PSMC5P62195 406 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 TRIP13Q15645 432 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-201ENST00000221232 QPCTQ16769 361 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 LRIG3Q6UXM1 1119 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 RUFY4Q6ZNE9 571 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 NEK9Q8TD19 979 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 ZSWIM1Q9BR11 485 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 PDCD2LQ9BRP1 358 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 CCDC113Q9H0I3 377 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 MYOZ2Q9NPC6 264 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 ZNRF3Q9ULT6 936 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 CYP11B1P15538 503 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 SMTNP53814 917 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 SLC29A2Q14542 456 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 TMEM161BQ8NDZ6 487 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 CPA5Q8WXQ8 436 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 NAP1L3Q99457 506 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 TBC1D22BQ9NU19 505 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 CAPN7Q9Y6W3 813 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 PCNTO95613 3336 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 RPTORQ8N122 1335 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 CLDN3O15551 220 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 PMS2P54278 862 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 MFAP3P55082 362 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 DMP1Q13316 513 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 SEL1L2Q5TEA6 688 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 FAM71AQ8IYT1 594 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 PARD3BQ8TEW8 1205 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 ZKSCAN4Q969J2 545 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 RNF25Q96BH1 459 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-201ENST00000221232 SELENOSQ9BQE4 189 aa15.72■□□□□ 0.11
CNOT3-201ENST00000221232 HNRNPDLO14979 420 aaKnown RBP15.71■□□□□ 0.11
CNOT3-201ENST00000221232 TBC1D12O60347 775 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 PEX10O60683 326 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 VPS41P49754 854 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 PPP2R2AP63151 447 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 MTMR3Q13615 1198 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 KRT39Q6A163 491 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 SV2AQ7L0J3 742 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 NLRX1Q86UT6 975 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 KAT2BQ92831 832 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 PXMP2Q9NR77 195 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 ZDHHC18Q9NUE0 388 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 STK32BQ9NY57 414 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 ATAD5Q96QE3 1844 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 COL4A5P29400 1685 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 WDR64B1ANS9 1081 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 ZNF862O60290 1169 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 PLA2G6O60733 806 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 RARAP10276 462 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 GJC1P36383 396 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 PEX5P50542 639 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 IFI35P80217 286 aaPredicted RBP15.71■□□□□ 0.11
CNOT3-201ENST00000221232 CCDC38Q502W7 563 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 SPOPLQ6IQ16 392 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 ZDHHC24Q6UX98 284 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 B4GALNT4Q76KP1 1039 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 RAB20Q9NX57 234 aa15.71■□□□□ 0.11
CNOT3-201ENST00000221232 TTC7AQ9ULT0 858 aaPredicted RBP15.71■□□□□ 0.11
CNOT3-201ENST00000221232 ADGRA3Q8IWK6 1321 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 BHMG1C9JSJ3 638 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-201ENST00000221232 WDR46O15213 610 aaKnown RBP15.7■□□□□ 0.1
CNOT3-201ENST00000221232 HMGB2P26583 209 aaKnown RBP15.7■□□□□ 0.1
CNOT3-201ENST00000221232 PRKG1Q13976 671 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 SLC39A4Q6P5W5 647 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 PASD1Q8IV76 773 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 HELQQ8TDG4 1101 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 ATG4AQ8WYN0 398 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.7■□□□□ 0.1
CNOT3-201ENST00000221232 RAPGEF5Q92565 580 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 SEPT9Q9UHD8 586 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-201ENST00000221232 PGAP2Q9UHJ9 254 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 GMNCA6NCL1 334 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 H0YHG0 523 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 ZBED4O75132 1171 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 PHF2O75151 1096 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 PTGIRP43119 386 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 ACOT2P49753 483 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 PDE6CP51160 858 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 SEZ6Q53EL9 994 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 NBPF12Q5TAG4 269 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-201ENST00000221232 FAM83AQ86UY5 434 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 C4orf19Q8IY42 314 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 ARFGAP2Q8N6H7 521 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 NT5C1BQ96P26 610 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 AZI2Q9H6S1 392 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 RNF146Q9NTX7 359 aa15.7■□□□□ 0.1
CNOT3-201ENST00000221232 FOXO6A8MYZ6 492 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms