RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 RESTQ13127 1097 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 MPP3Q13368 585 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 ZBTB41Q5SVQ8 909 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
CDKN3-201ENST00000216414 EFCAB12Q6NXP0 572 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 PASD1Q8IV76 773 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 HOMEZQ8IX15 550 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 LILRB2Q8N423 598 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 RNF169Q8NCN4 708 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 PMFBP1Q8TBY8 1022 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 GAB3Q8WWW8 586 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 ADAM2Q99965 735 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 LRFN3Q9BTN0 628 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 KIAA1586Q9HCI6 787 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 IGSF5Q9NSI5 407 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 IFT57Q9NWB7 429 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 MSRAQ9UJ68 235 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 KAT6AQ92794 2004 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 ZMYM3Q14202 1370 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 MYADML2A6NDP7 307 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 GAS7O60861 476 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 ESRRBO95718 433 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 RBP3P10745 1247 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 SDSP20132 328 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 CTGFP29279 349 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 DRICH1Q6PGQ1 229 aaPredicted RBP4.03□□□□□ -1.76
CDKN3-201ENST00000216414 BTNL9Q6UXG8 535 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 MICALCLQ6ZW33 695 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 FAM98AQ8NCA5 519 aaKnown RBP4.03□□□□□ -1.76
CDKN3-201ENST00000216414 TFAP2CQ92754 450 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 MKL1Q969V6 931 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 DUSP26Q9BV47 211 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 FRMD4BQ9Y2L6 1034 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 CCDC9Q9Y3X0 531 aaKnown RBP4.03□□□□□ -1.76
CDKN3-201ENST00000216414 FPGT-TNNI3KV9GXZ4 949 aa4.03□□□□□ -1.76
CDKN3-201ENST00000216414 B5MCH6 92 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 PFKMP08237 780 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 EGR2P11161 476 aaPredicted RBP4.02□□□□□ -1.77
CDKN3-201ENST00000216414 GPR15P49685 360 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 PPARAQ07869 468 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 RBL2Q08999 1139 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 UBE3CQ15386 1083 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 GLB1L2Q8IW92 636 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 NXPE1Q8N323 547 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 MDM1Q8TC05 714 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 SLC9A6Q92581 669 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 ARMC5Q96C12 935 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 PHACTR3Q96KR7 559 aa4.02□□□□□ -1.77
CDKN3-201ENST00000216414 A0A1W2PR48 441 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 TBKBP1A7MCY6 615 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 CDKL5O76039 1030 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 IGLV2-14P01704 120 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 LTA4HP09960 611 aaKnown RBP4.01□□□□□ -1.77
CDKN3-201ENST00000216414 MPLP40238 635 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 LRRC32Q14392 662 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 CCDC178Q5BJE1 867 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 FAM102AQ5T9C2 384 aaPredicted RBP4.01□□□□□ -1.77
CDKN3-201ENST00000216414 ARHGEF25Q86VW2 580 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 EFHBQ8N7U6 833 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 ZNF384Q8TF68 577 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 CHTF18Q8WVB6 975 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 ZNF496Q96IT1 587 aaPredicted RBP4.01□□□□□ -1.77
CDKN3-201ENST00000216414 MTFR1LQ9H019 292 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 THG1LQ9NWX6 298 aaKnown RBP4.01□□□□□ -1.77
CDKN3-201ENST00000216414 RNF7Q9UBF6 113 aa4.01□□□□□ -1.77
CDKN3-201ENST00000216414 SALL3Q9BXA9 1300 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 PRSS38A1L453 326 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 LCHNA4D1U4 455 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 ZNF891A8MT65 544 aaPredicted RBP4□□□□□ -1.77
CDKN3-201ENST00000216414 KPNA6O60684 536 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 ITGA10O75578 1167 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 FOSP01100 380 aaPredicted RBP4□□□□□ -1.77
CDKN3-201ENST00000216414 FDXRP22570 491 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 SPDYE7PQ495Y7 208 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 ZFP28Q8NHY6 868 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 Q96MF0 132 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 NEU1Q99519 415 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 ATP11BQ9Y2G3 1177 aa4□□□□□ -1.77
CDKN3-201ENST00000216414 MARCH11A6NNE9 402 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 PPP1R12AO14974 1030 aaPredicted RBP3.99□□□□□ -1.77
CDKN3-201ENST00000216414 MATN4O95460 622 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 CANXP27824 592 aaKnown RBP3.99□□□□□ -1.77
CDKN3-201ENST00000216414 NEK4P51957 841 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 KPNA1P52294 538 aaPredicted RBP3.99□□□□□ -1.77
CDKN3-201ENST00000216414 CHN2P52757 468 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 BMT2Q1RMZ1 405 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 SOGA3Q5TF21 947 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 METRNLQ641Q3 311 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 ABHD15Q6UXT9 468 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 PDZD4Q76G19 769 aaPredicted RBP3.99□□□□□ -1.77
CDKN3-201ENST00000216414 CEP95Q96GE4 821 aa3.99□□□□□ -1.77
CDKN3-201ENST00000216414 EVLQ9UI08 416 aaPredicted RBP3.99□□□□□ -1.77
CDKN3-201ENST00000216414 MAST3O60307 1309 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 IKBKBO14920 756 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 TGM5O43548 720 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 F2P00734 622 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 CFIP05156 583 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 ABCG1P45844 678 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
CDKN3-201ENST00000216414 SIM1P81133 766 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms