RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TMC2Q8TDI7 906 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 DHX38Q92620 1227 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 PBKQ96KB5 322 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 AP1M1Q9BXS5 423 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 MAF1Q9H063 256 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 SPON1Q9HCB6 807 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 VPS18Q9P253 973 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 NOC2LQ9Y3T9 749 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GSTTP1A0A1W2PQM5 241 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 CES2O00748 559 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 EDNRBP24530 442 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GPC3P51654 580 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 MFAP3P55082 362 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GUCY2DQ02846 1103 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 PPATQ06203 517 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 STRN3Q13033 797 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 KCTD19Q17RG1 926 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 HSP90B2PQ58FF3 399 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ERO1BQ86YB8 467 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 HELQQ8TDG4 1101 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 SHC3Q92529 594 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 RUBCNQ92622 972 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 NT5C1BQ96P26 610 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 PORCNQ9H237 461 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ACBD3Q9H3P7 528 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 TXNRD2Q9NNW7 524 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 SUCLA2Q9P2R7 463 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 NOCTQ9UK39 431 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 COQ4Q9Y3A0 265 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 SIP14410 1827 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 CNMDO75829 334 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GGPS1O95749 300 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 MMEP08473 750 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ACOT2P49753 483 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 WNT7BP56706 349 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 NLRP11P59045 1033 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 PRPF4BQ13523 1007 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GLE1Q53GS7 698 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 USP37Q86T82 979 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ANKRD13AQ8IZ07 590 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 TATDN2Q93075 761 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 VTI1AQ96AJ9 217 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 HES6Q96HZ4 224 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ZBTB45Q96K62 511 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 VIPAS39Q9H9C1 493 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 EPB41L5Q9HCM4 733 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ANKFY1Q9P2R3 1169 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 FAN1Q9Y2M0 1017 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 IGKV6D-21A0A0A0MT36 114 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ZNF233A6NK53 670 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 H0YCG3 227 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 PGRMC1O00264 195 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 RAD51CO43502 376 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CHRNB2P17787 502 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 MARK3P27448 753 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 TCF7P36402 384 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 FAM193AP78312 1265 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 DEPTORQ8TB45 409 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ACTRT1Q8TDG2 376 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 RIN2Q8WYP3 895 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CDCA5Q96FF9 252 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 HAPLN2Q9GZV7 340 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ARIH2O95376 493 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CALCAP01258 141 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 EDN1P05305 212 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 STAT5BP51692 787 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 EPHB4P54760 987 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 TNNC1P63316 161 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 DRP2Q13474 957 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 C9orf131Q5VYM1 1079 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 IFT81Q8WYA0 676 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ZNF516Q92618 1163 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CEP89Q96ST8 783 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.6□□□□□ -1.035e-7■■■□□ 17.7
HMGXB4-201ENST00000216106 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CTTNBP2NLQ9P2B4 639 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 AGO2Q9UKV8 859 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 K7ERI5 159 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 EXTL3O43909 919 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 CYP11B1P15538 503 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.034e-7■■■■□ 22.3
HMGXB4-201ENST00000216106 TNNI1P19237 187 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ARL2P36404 184 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 NAMPTP43490 491 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 PDE6CP51160 858 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 FMO1Q01740 532 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 NEDD9Q14511 834 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 TRADDQ15628 312 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 Q3C1V9 767 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 ZBTB41Q5SVQ8 909 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms