RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 HMGCS2P54868 508 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 ZRSR2Q15696 482 aaKnown RBP11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 SLC9C1Q4G0N8 1177 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 FBXO38Q6PIJ6 1188 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 HS2ST1Q7LGA3 356 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 NLRX1Q86UT6 975 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 DAW1Q8N136 415 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 PCDHA13Q9Y5I0 950 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 ATP8B3O60423 1300 aa11.52□□□□□ -0.57
APOBEC3D-201ENST00000216099 ERICH4A6NGS2 130 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 FZD6O60353 706 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 PLEKP08567 350 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 ANXA13P27216 316 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 SERPINB3P29508 390 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 RARRES1P49788 294 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 HIRAP54198 1017 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 PSMC5P62195 406 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 SNRPFP62306 86 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 PAPD7Q5XG87 772 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 NSMFQ6X4W1 530 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 C12orf56Q8IXR9 622 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 SLC17A8Q8NDX2 589 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 JPH3Q8WXH2 748 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 SLC35C1Q96A29 364 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 TEX13BQ9BXU2 312 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 DEF6Q9H4E7 631 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 NFASCO94856 1347 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 AKR1B10O60218 316 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 MYCLP12524 364 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 GBP6Q6ZN66 633 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 TRAPPC11Q7Z392 1133 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 FAM186BQ8IYM0 893 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 NSUN6Q8TEA1 469 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 ERP27Q96DN0 273 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 IFIH1Q9BYX4 1025 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 LACRTQ9GZZ8 138 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 GBP3Q9H0R5 595 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 BCAS3Q9H6U6 928 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 LUC7LQ9NQ29 371 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 AGPAT3Q9NRZ7 376 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 LARSQ9P2J5 1176 aaKnown RBP11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 RIPK3Q9Y572 518 aa11.51□□□□□ -0.57
APOBEC3D-201ENST00000216099 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 TLR2O60603 784 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 NR3C2P08235 984 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 GJA5P36382 358 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 GEMIN4P57678 1058 aaKnown RBP11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 TMEM132BQ14DG7 1078 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 EXOC3L4Q17RC7 722 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 RDH13Q8NBN7 331 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 RSPH1Q8WYR4 309 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 CDHR1Q96JP9 859 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 TMEM206Q9H813 350 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 PKD2L1Q9P0L9 805 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 USP2O75604 605 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 PLS3P13797 630 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 PON1P27169 355 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 YWHABP31946 246 aaKnown RBP11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 CASP4P49662 377 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 CLCN6P51797 869 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 SEPT6Q14141 434 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 ASIC2Q16515 512 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 KLHDC7AQ5VTJ3 777 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 TRIM58Q8NG06 486 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 HVCN1Q96D96 273 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 NLRC4Q9NPP4 1024 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
APOBEC3D-201ENST00000216099 CLIC2O15247 247 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 CCNE2O96020 404 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 RBP3P10745 1247 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 ST13P50502 369 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 CYP27A1Q02318 531 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 PRAMEF18Q5VWM3 479 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 CHST13Q8NET6 341 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 ACCSQ96QU6 501 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 IWS1Q96ST2 819 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 CRACR2AQ9BSW2 395 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 MOV10L1Q9BXT6 1211 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 ADARB2Q9NS39 739 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 CYP39A1Q9NYL5 469 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 SAMM50Q9Y512 469 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms