RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 GUCY1A2P33402 732 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ADD1P35611 737 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 GPC3P51654 580 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 POLD3Q15054 466 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 TDRD10Q5VZ19 366 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 ALKBH2Q6NS38 261 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PPP4R3CPQ6ZMV5 832 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SNX31Q8N9S9 440 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CCDC54Q8NEL0 328 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MUC3BQ9H195 1237 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 USP17L5A8MUK1 530 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 BASP1P80723 227 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 STX5Q13190 355 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MAPRE1Q15691 268 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 IFNKQ9P0W0 207 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 F8W810 466 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 KMOO15229 486 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 KRT1P04264 644 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PRIM1P49642 420 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 MAPRE2Q15555 327 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SLITRK1Q96PX8 696 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 RACGAP1Q9H0H5 632 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CHPF2Q9P2E5 772 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SUCOQ9UBS9 1254 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 GPC1P35052 558 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CDK17Q00537 523 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PLEKHM2Q8IWE5 1019 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CRYL1Q9Y2S2 319 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PRR23AA6NEV1 266 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 RHOXF2BP0C7M4 288 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CCDC166P0CW27 439 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PTPN3P26045 913 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 GYS2P54840 703 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PSMC6P62333 389 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FAF2Q96CS3 445 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 RHOXF2Q9BQY4 288 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ASAP1Q9ULH1 1129 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 C16orf96A6NNT2 1141 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CHURC1-FNTBB4DL54 471 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 JAK3P52333 1124 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CAV3P56539 151 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SMU1Q2TAY7 513 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MGAT5BQ3V5L5 792 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 NUGGCQ68CJ6 796 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ZNF655Q8N720 491 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 MLKLQ8NB16 471 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SLC20A1Q8WUM9 679 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 VPS54Q9P1Q0 977 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 XDHP47989 1333 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 GGPS1O95749 300 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FAM200BP0CF97 657 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CBX5P45973 191 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 EFTUD2Q15029 972 aaKnown RBP eCLIP3.64□□□□□ -1.83
NEB-201ENST00000172853 ZNF555Q8NEP9 628 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 OSBP2Q969R2 916 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 DNAJC12Q9UKB3 198 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 TROQ12816 1431 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 ASNSP08243 561 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 NCAM1P13591 858 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ZNF512Q96ME7 567 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 INTS7Q9NVH2 962 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 MAD2L2Q9UI95 211 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 HCN4Q9Y3Q4 1203 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 A0A088AWK7 358 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ANKRD65E5RJM6 399 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 XYLBO75191 536 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ZNF10P21506 573 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 SOAT1P35610 550 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 HALP42357 657 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 HARS2P49590 506 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 SARSP49591 514 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 CPT1AP50416 773 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 OSTNP61366 133 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CYB5D1Q6P9G0 228 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 LEMD2Q8NC56 503 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ANGPTL2Q9UKU9 493 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SOX13Q9UN79 622 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SPEF1Q9Y4P9 236 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ZNF532Q9HCE3 1301 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 YTHDC2Q9H6S0 1430 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 CLCN6P51797 869 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 TMEM132DQ14C87 1099 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 RASIP1Q5U651 963 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CRLF3Q8IUI8 442 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 ATP6V0D2Q8N8Y2 350 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 APPBP2Q92624 585 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CALR3Q96L12 384 aaKnown RBP3.63□□□□□ -1.83
NEB-201ENST00000172853 MAGEC1O60732 1142 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 URODP06132 367 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 NPEPPSP55786 919 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CCDC142Q17RM4 750 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 PGM2L1Q6PCE3 622 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 GLB1LQ6UWU2 654 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CAPN12Q6ZSI9 719 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 TUBGCP3Q96CW5 907 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 PACSIN1Q9BY11 444 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SLC13A1Q9BZW2 595 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SLC24A3Q9HC58 644 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 RAD17O75943 681 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms