RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 GSTA1P08263 222 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 RARGP13631 454 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 HSPA6P17066 643 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 PDE6CP51160 858 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 ICA1Q05084 483 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 TRIP13Q15645 432 aaPredicted RBP11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 CLUL1Q15846 466 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 TRMT1LQ7Z2T5 733 aaKnown RBP11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 C1orf54Q8WWF1 131 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 CCDC17Q96LX7 622 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 ATP6V0A4Q9HBG4 840 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 TMEM120BA0PK00 339 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 ENO4A6NNW6 628 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 SNX3O60493 162 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 RARAP10276 462 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 CTNNA2P26232 953 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 KIF22Q14807 665 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 STXBP4Q6ZWJ1 553 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 KRT27Q7Z3Y8 459 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 CROCCP2Q86T23 111 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 CTNNAL1Q9UBT7 734 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 ASIC3Q9UHC3 531 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 RPS6KL1Q9Y6S9 549 aa11.29□□□□□ -0.6
CX3CL1-201ENST00000006053 PASKQ96RG2 1323 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 SGPL1O95470 568 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 SERPINB2P05120 415 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 TBC1D10BQ4KMP7 808 aaPredicted RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 HSD17B14Q9BPX1 270 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 USP15Q9Y4E8 981 aaPredicted RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 PFASO15067 1338 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 IGF2BP3O00425 579 aaKnown RBP eCLIP11.28□□□□□ -0.62e-6■□□□□ 10.2
CX3CL1-201ENST00000006053 BBOX1O75936 387 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 NQO1P15559 274 aaKnown RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 VPS41P49754 854 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 RBBP5Q15291 538 aaKnown RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 SYDE2Q5VT97 1194 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 C11orf63Q6NUN7 778 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 BTNL9Q6UXG8 535 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 RNF207Q6ZRF8 634 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 AGAP11Q8TF27 550 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 ZC3H12CQ9C0D7 883 aaKnown RBP11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 TBK1Q9UHD2 729 aa11.28□□□□□ -0.6
CX3CL1-201ENST00000006053 CFAP73A6NFT4 308 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 CLDN3O15551 220 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 ANP32DO95626 131 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 ECEL1O95672 775 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 NDUFB10O96000 172 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 GBP1P32455 592 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 PEX5P50542 639 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 NCALDP61601 193 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 CETN1Q12798 172 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 TEKT1Q969V4 418 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 RUNDC3BQ96NL0 473 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 NUP85Q9BW27 656 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.6
CX3CL1-201ENST00000006053 KIF13BQ9NQT8 1826 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 A8MUI8 341 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 K7ENM7 598 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 GAS7O60861 476 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 SUN1O94901 812 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 ALDH5A1P51649 535 aaPredicted RBP11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 RWDD2BP57060 319 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 PPP3CAQ08209 521 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 APOBEC3HQ6NTF7 200 aaKnown RBP11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 ART4Q93070 314 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 FAM210AQ96ND0 272 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 DMAC2Q9NW81 257 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 CYP26A1O43174 497 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 RTN2O75298 545 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 CIITAP33076 1130 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 TNIP1Q15025 636 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 LMO3Q8TAP4 145 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 ELMO3Q96BJ8 720 aa11.27□□□□□ -0.61
CX3CL1-201ENST00000006053 ZNF653Q96CK0 615 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms