RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Btnl9Q8BJE2 536 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ftsj1Q8CBC7 324 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Sfmbt1Q9JMD1 863 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Btg4O70552 250 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Cyp4f37Q3V1F1 546 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Lrig2Q52KR2 1054 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Jade1Q6ZPI0 834 aaKnown RBP16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 PrcpQ7TMR0 491 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Q8C5C9 218 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Fam228aQ8CDW1 299 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 PpanQ91YU8 470 aaKnown RBP16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 SncbQ91ZZ3 133 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 RragcQ99K70 398 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ebag9Q9D0V7 213 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rmi1Q9D4G9 616 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Psmg1Q9JK23 289 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Exoc3l2D3YUP5 789 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ccdc170D3YXL0 722 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Mcl1P97287 331 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Parp3Q3ULW8 533 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Q6GQV0 436 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 C130026I21RikQ8C898 291 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Agbl2Q8CDK2 862 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Trim32Q8CH72 655 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Nup58Q8R332 587 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Pomgnt1Q91X88 660 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Lztfl1Q9JHQ5 299 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Cntnap2Q9CPW0 1332 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Fam129cD3YZB0 591 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Gm3127E9Q9P5 263 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Gm3453K7N724 263 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Fgfr2P21803 821 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ighmbp2P40694 993 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 VegfbP49766 207 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Fam198aQ3UY90 562 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 OgtQ8CGY8 1046 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Itm2cQ91VK4 269 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Trim54Q9ERP3 366 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Tll2Q9WVM6 1012 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Mast2Q60592 1734 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Pde1bQ01065 535 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 D130040H23RikQ8BII3 405 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Tmem220Q8BP07 167 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Sec63Q8VHE0 760 aaKnown RBP16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ralgps2Q9ERD6 590 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Olig1Q9JKN5 260 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ppp2r3dQ9Z176 491 aa16.39■□□□□ 0.21
Upf1-202ENSMUST00000215817 ThbdP15306 577 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Fcer2P20693 331 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 SpoplQ2M2N2 392 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Plppr4Q7TME0 766 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Aoc2Q812C9 757 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Hip1Q8VD75 1029 aaKnown RBP16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ces1fQ91WU0 561 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Trim66Q924W6 1242 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Cdc26Q99JP4 85 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Sar1bQ9CQC9 198 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Lrrc74aA0A1Y7VMD6 494 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ccnyl1D3YUJ3 367 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ifi205aQ8CGE8 404 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Iqsec1Q8R0S2 961 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Fam49bQ921M7 324 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ano7Q14AT5 859 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Tgoln2Q62314 363 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Gigyf2Q6Y7W8 1291 aaKnown RBP16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Tmc3Q7TQ69 1130 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Sdad1Q80UZ2 687 aaKnown RBP16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Wdr27Q8C5V5 780 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Wdr72D3YYM4 1114 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 HmgcrQ01237 887 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Caln1Q9JJG7 219 aa16.38■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ank1Q02357 1862 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Men1O88559 611 aaKnown RBP16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ccnd2P30280 289 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Pou6f1Q07916 301 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Polr2eQ80UW8 210 aaKnown RBP16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ttc26Q8BS45 554 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Kcnv1Q8BZN2 503 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 GanQ8CA72 597 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ndufab1Q9CR21 156 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Gabbr1Q9WV18 960 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Myo1eE9Q634 1107 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 DffaO54786 331 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 EmbP21995 330 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Nr2c1Q505F1 590 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 NfrkbQ6PIJ4 1296 aaKnown RBP16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Eif4bQ8BGD9 611 aaKnown RBP16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ubxn11Q9D572 484 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Arih1Q9Z1K5 555 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 IvlP48997 467 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Uchl4P58321 233 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Mrgprb1Q3UG61 350 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Etf1Q8BWY3 437 aaKnown RBP16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Kbtbd12Q9D618 625 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Tspan3Q9QY33 253 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Lypla2Q9WTL7 231 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Ddx4Q61496 702 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 IgflQ6B9Z0 140 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 ChpfQ6IQX7 774 aa16.37■□□□□ 0.21
Upf1-202ENSMUST00000215817 Pnma2Q8BHK0 365 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms