RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Zhx3Q8C0Q2 951 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Stap2Q8R0L1 411 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 TarsQ9D0R2 722 aaKnown RBP9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cyfip2Q5SQX6 1253 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pcdhga4Q91XY4 930 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 ArhgdiaQ99PT1 204 aaKnown RBP9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ggps1Q9WTN0 300 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 C2cd2E9Q3C1 696 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hnrnph1O35737 449 aaKnown RBP9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tlk2O55047 718 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pid1Q3UBG2 217 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ifnl2Q4VK74 193 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Zfp341Q6PGC9 846 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ppp2r3cQ9JK24 453 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cul4bA2A432 970 aaKnown RBP9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Exoc4O35382 975 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Shc3Q61120 474 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tmem120aQ8C1E7 343 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 MymkQ9D1N4 221 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Noxred1Q9D3S5 366 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rabgef1Q9JM13 491 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pja1O55176 578 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ifnb1P01575 182 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Creb3Q61817 404 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 HadhaQ8BMS1 763 aaKnown RBP9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Clec4gQ8BNX1 294 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Epha10Q8BYG9 1007 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pcdhgb4Q91XX6 912 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 1700003F12RikA2AKE5 210 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm6588E9Q3K0 461 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Eddm13E9Q7F5 164 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fgd3O88842 733 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rtl3Q6P1Y1 553 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 PodnQ7TQ62 611 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 RimklbQ80WS1 387 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Washc5Q8C2E7 1159 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Stxbp5Q8K400 1152 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cdc42ep4Q9JM96 349 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Adamts7Q68SA9 1657 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pim2Q62070 370 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Senp6Q6P7W0 1132 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm13023A2A8N2 498 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 FtoQ8BGW1 502 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mmgt1Q8K273 131 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tceal1Q921P9 165 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Trim12aQ99PQ1 284 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Snf8Q9CZ28 258 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 ParvbQ9ES46 365 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Itpripl1A2ASA8 547 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm3182K7N6T8 263 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fkbp1aP26883 108 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hnrnph2P70333 449 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tmed8Q3UHI4 326 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Arhgef9Q3UTH8 516 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Sin3bQ62141 1098 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Q80ZQ3 298 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Snip1Q8BIZ6 383 aaKnown RBP9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Usp38Q8BW70 1042 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Txndc5Q91W90 417 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Q9D1F3 157 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 JcadQ5DTX6 1320 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tcp11x2A2AEI7 503 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Lzts3A2AHG0 700 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 CatspereP0DP43 985 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Parp3Q3ULW8 533 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Asap3Q5U464 904 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gucy2gQ6TL19 1100 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cyfip1Q7TMB8 1253 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mageb18Q8BQR7 327 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Slc8a2Q8K596 921 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tspan17Q9D7W4 270 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rnf6Q9DBU5 667 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Erap1Q9EQH2 930 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pard6bQ9JK83 371 aa9.76□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm5795E9PZN8 263 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm6882J3KMT3 313 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hsd17b1P51656 344 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 NyxP83503 476 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm10662Q3UT86 313 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mcf2lQ64096 1149 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ints2Q80UK8 1198 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pgm1Q9D0F9 562 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Doc2gQ9ESN1 387 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Acot3Q9QYR7 432 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Trim12cD3Z3L3 497 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Syt2P46097 422 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 GmncQ3URY2 333 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rhox12Q4TU81 186 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fbxo41Q6NS60 873 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rfx6Q8C7R7 927 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mtmr4Q91XS1 1190 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Utp11Q9CZJ1 253 aaKnown RBP9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rnf4Q9QZS2 194 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hebp1Q9R257 190 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Naaladl2A0A0N4SUJ3 795 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 DtnbO70585 659 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Prr7Q3V0I2 269 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tbx2Q60707 711 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 HltfQ6PCN7 1003 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Eva1bQ8K2Y3 164 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms