RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Tagap1P0CAX8 505 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Krt19P19001 403 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Sept2P42208 361 aaKnown RBP12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Cops2P61202 443 aaKnown RBP12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Yy1Q00899 414 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Gas1Q01721 343 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ect2Q07139 913 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Gm4981Q3ULJ8 291 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 OgdhQ60597 1023 aaKnown RBP12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Fgfr1opQ66JX5 399 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Q8BGD0 127 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ipo5Q8BKC5 1097 aaKnown RBP12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 IarsQ8BU30 1262 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Zfp449Q8CB76 518 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Btbd7Q8CFE5 1130 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Bhmt2Q91WS4 363 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Polr3cQ9D483 533 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Krt17Q9QWL7 433 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rasgrp1Q9Z1S3 795 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ggt5Q9Z2A9 573 aa12.25□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Flt1P35969 1333 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rasal2E9PW37 1286 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Akr1b7P21300 316 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 RxrbP28704 520 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ppp4cP97470 307 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Krt77Q6IFZ6 572 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Retreg2Q6NS82 541 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Nucks1Q80XU3 234 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ppp1r11Q8K1L5 131 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Fkbp6Q91XW8 327 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Sec14l2Q99J08 403 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Psmd6Q99JI4 389 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ergic2Q9CR89 377 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Klrc2Q9WTJ9 238 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Maml3D4QGC2 1135 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rap1gds1E9Q912 607 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Vmn2r68L7N2B3 851 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Cyp2b9P12790 491 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Q3TTJ4 293 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Nlrp9cQ66X01 1004 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Swap70Q6A028 585 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Tor4aQ8BH02 426 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Depdc1bQ8BH88 529 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rab44Q8CB87 725 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Angel1Q8VCU0 667 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Nmrk1Q91W63 195 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Prss23Q9D6X6 382 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Fthl17aQ9DAX0 182 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 IkbipQ9DBZ1 373 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Cse1lQ9ERK4 971 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Scgb2b21A0A087WQA9 112 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Armc3A2AU72 881 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Mroh8E9PYI4 1049 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Gm38392E9Q2A2 434 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ppp1r9aH3BJD6 1292 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Mmp15O54732 657 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Nrp1P97333 923 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Aars2Q14CH7 980 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Tnfaip8l3Q3TBL6 204 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ccdc127Q3TC33 260 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 SpopQ6ZWS8 374 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rusc1Q8BG26 893 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Trim47Q8C0E3 641 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Epc2Q8C0I4 808 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rpap2Q8VC34 614 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Caskin2Q8VHK1 1201 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Pcdh18Q8VHR0 1134 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Dnajc3Q91YW3 504 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Rev1Q920Q2 1249 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Tacc3Q9JJ11 631 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ltbp2O08999 1813 aa12.24□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Znf804aA2AKY4 1200 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Marcksl1P28667 200 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Hcls1P49710 486 aaKnown RBP12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 FerP70451 823 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ccdc85aQ5SP85 500 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Q6DFW0 481 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Uts2bQ765I1 113 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 TbataQ7TSD4 393 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 PimregQ8BFY7 231 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Mageb18Q8BQR7 327 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Commd10Q8JZY2 202 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Ccdc137Q8R0K4 290 aaKnown RBP12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Nt5c1bQ91YE9 573 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Coa7Q921H9 231 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 PlgrktQ9D3P8 147 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Fip1l1Q9D824 581 aaKnown RBP12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Pard6bQ9JK83 371 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Eif2ak1Q9Z2R9 619 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 RptorQ8K4Q0 1335 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Cfap221A9Q751 836 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 DgkkE9Q7N4 1118 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Fgfr1P16092 822 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 AaasP58742 546 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Mtus1Q5HZI1 1210 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 PicalmQ7M6Y3 660 aaKnown RBP12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 PhkbQ7TSH2 1085 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 RbakQ8BQC8 711 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 CnstQ8CBC4 711 aa12.23□□□□□ -0.45
Prpf40b-208ENSMUST00000136980 Fbxl13Q8CDU4 790 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms