RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Arrdc4A0A0B4J1F4 415 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Frmd7A2AD83 703 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc13D3YV10 709 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Yy1Q00899 414 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Zfp953Q3UPV7 304 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Efl1Q8C0D5 1127 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Epc2Q8C0I4 808 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Usp37Q8C0R0 979 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Scyl2Q8CFE4 930 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Krtap5-3Q9D226 196 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Snrnp35Q9D384 244 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 SmapQ9R0P4 181 aaKnown RBP9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Akap11E9Q777 1895 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Bfsp1A2AMT1 669 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fam129cD3YZB0 591 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 R3hdm1E9Q9Q2 1135 aaKnown RBP9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sar1aP36536 198 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PtgdrP70263 357 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Il17raQ60943 864 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ppp1r12bQ8BG95 976 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Wasf2Q8BH43 497 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Depdc1bQ8BH88 529 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Snx30Q8CE50 437 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tgm5Q9D7I9 724 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Styxl1Q9DAR2 321 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 DexiQ9WUQ7 95 aa9.4□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nme9A0A1L1SUL6 329 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm28043E0CXC2 719 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Psmc4P54775 418 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 AaasP58742 546 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ugt1a2P70691 533 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Foxd4Q60688 444 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rasa3Q60790 834 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gga3Q8BMI3 718 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Alpk1Q9CXB8 1231 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Med10Q9CXU0 135 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 TbcbQ9D1E6 244 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 MymkQ9D1N4 221 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Sgf29Q9DA08 293 aaKnown RBP9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Dmap1Q9JI44 468 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gtf2ird1Q9JI57 1104 aaKnown RBP9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Aox3G3X982 1335 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Shank2Q80Z38 1476 aa9.4□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Apol10bG3X9K7 334 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Sema3fO88632 785 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 AfpP02772 605 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ccnd1P25322 295 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Lzts1P60853 599 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Kpnb1P70168 876 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Adcy8P97490 1249 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Slc9a1Q61165 820 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Foxo6Q70KY4 559 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Sec24bQ80ZX0 1251 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Olfr805Q8VFI4 319 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pcdh18Q8VHR0 1134 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Atp6v1b1Q91YH6 513 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tnpo2Q99LG2 887 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ube4bQ9ES00 1173 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Bub1bQ9Z1S0 1052 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Fem1bQ9Z2G0 627 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ptpn23Q6PB44 1692 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 A0A286YCQ6 122 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Krt28A6BLY7 462 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Unc5cO08747 931 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ftl1P29391 183 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Eps15P42567 897 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Oca2Q62052 833 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tmcc1Q69ZZ6 649 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 SnphQ80U23 495 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ubap1Q8BH48 502 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 HscbQ8K3A0 234 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Vmn1r191Q8K4D0 298 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 MyocdQ8VIM5 935 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Eif4enif1Q9EST3 983 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Git2Q9JLQ2 708 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Edf1Q9JMG1 148 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rfwd2Q9R1A8 733 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tbc1d16A2ABG4 766 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 March10E9PX79 788 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Heatr4E9Q357 955 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cd44P15379 778 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Krt19P19001 403 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Kmt5aQ2YDW7 349 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Samhd1Q60710 627 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Dhx37Q6NZL1 1150 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cnksr2Q80YA9 1032 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 PolrmtQ8BKF1 1207 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rassf9Q8K342 435 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ero1bQ8R2E9 467 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rhobtb3Q9CTN4 611 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 PlekQ9JHK5 350 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Arl6ip4Q9JM93 229 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cetn2Q9R1K9 172 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Speer3W4VSP1 261 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ptpn20O55082 426 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rab17P35292 214 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Serping1P97290 504 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Stx2Q00262 289 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 MlxipQ2VPU4 917 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Plekha7Q3UIL6 1118 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms